Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq120 98.7 1e-15 seq41 82.4 8e-11 >seq120 Length=574313 Score = 98.7 bits (108), Expect = 1e-15 Identities = 74/87 (85%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 78197 GCCAACACCGCCGTGCCCGAGTCGCTGAACTTCCCGCACGAGGCCGTCGGCCACGACCAC 78256 |||||| | | |||||||| |||||||||| ||||||||| ||| ||| ||||||| Sbjct 3546 GCCAACTCGGGCGTGCCCGCCTCGCTGAACTACCCGCACGACCGCGTAGGCTCCGACCAC 3605 Query 78257 GACTCGGTGGGCCTGTTCCAGCAGCGC 78283 |||||||||||||| |||||||||||| Sbjct 3606 GACTCGGTGGGCCTCTTCCAGCAGCGC 3632 >seq41 Length=375347 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 78211 GCCCGAGTCGCTGAACTTCCCGCACGAGGCCGTCGGCCACGACCACGACTCGGTGGGCCT 78270 |||||||||||| |||| || | |||| || ||||| |||| |||||||||||||| | Sbjct 30314 GCCCGAGTCGCTCAACTACCAGTACGACGCTGTCGGGTCCGACTACGACTCGGTGGGCGT 30373 Query 78271 GTTCCAGCAGCGC 78283 ||||||||||||| Sbjct 30374 GTTCCAGCAGCGC 30386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526596221199120