Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq130 86.0 6e-12 >seq130 Length=202609 Score = 86.0 bits (94), Expect = 6e-12 Identities = 261/397 (66%), Gaps = 5/397 (1%) Strand=Plus/Plus Query 123923 TCAAGGGT-TGGCCGACGCGTTTGTAATGCTGCGC-ATGCCGTACGAAAGCGACGAAGCA 123980 |||| ||| | |||||||| || | || || || | ||| | ||| ||| ||| || Sbjct 61209 TCAACGGTCTTGCCGACGCATTCATGATCATGGGCTACGCCTT-CGACAGCCCCGAGGCC 61267 Query 123981 AAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGC-TG 124039 ||| ||| || | ||||| ||| || || || ||| ||| | ||| || | || Sbjct 61268 AAGAGGCTCAACATTCAAATCTTCGAGACCATCTACCACGCCGCCCTCGAG-CGCTCGTG 61326 Query 124040 CGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGG 124099 ||| |||| || | ||| ||||||| | |||| ||||||||| || |||| || Sbjct 61327 CGAGATTGCAAAGGAGCTTGGCCCGTACGAGACGTACGAGGGCAGCCCAGCCAGCCAGGG 61386 Query 124100 TATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTT 124159 | ||||||||| | ||| || || || | ||||||||||| || | Sbjct 61387 CGAGCTCCAGTACGACCTCTGGGGTGTCACGCCCAGCTCCCTGTGGGACTGGGCCGAGCT 61446 Query 124160 AAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGAC 124219 || | || |||| |||||| |||| |||||||| || | || |||||||| Sbjct 61447 CAAGCGCAAGATTGCGACCCACGGTCTGCGAAACTCGCTTCTGCTCGCACCGATGCCGAC 61506 Query 124220 GGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTT 124279 ||| | || ||| || | || |||||| | ||| ||||||| ||| | ||| | Sbjct 61507 GGCGTCTACGAGTCAGATCCTCGGCTTCAACGAGTGCTTTGAGCCGTACACGAGCAACCT 61566 Query 124280 GTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTG 124316 ||| || || ||| | |||||||| || || ||| Sbjct 61567 CTACACCCGCCGTGTGCTCGCCGGCGAGTTCCAGGTG 61603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452001329836760