Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq130 183 4e-41 seq206 87.8 2e-12 >seq130 Length=202609 Score = 183 bits (202), Expect = 4e-41 Identities = 561/855 (66%), Gaps = 13/855 (2%) Strand=Plus/Minus Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 ||||| ||||| ||||| || || || | | |||||| || ||||||| || Sbjct 61035 GGAAGCGCGATACTGGCCAGGTTGCAGACGGCGACCTCATCAGGGGCACTGTACTCAATG 60976 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 || ||||| || | || || | ||| |||||||| | |||||| || || ||||| | Sbjct 60975 ATCTCCGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGG 60916 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || || |||||||||||||| |||| | || |||||||| || | || ||| ||| Sbjct 60915 TTGGCAGCGTCCTTGTAGAGCATGAATGGGTTGCCAGTCTCCGTCTGAGCCTCGAGGATA 60856 Query 116605 GCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTT 116663 || | ||| | | || | | || | || ||| | ||| || ||||| ||||||||| Sbjct 60855 GCGTACCAGAGCTTCTGGGCCTTG-ACCGTGCGGCGGGCCCGGCCCTCGCGCTCGTACTT 60797 Query 116664 TGTGTAGAGGGCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTT-ATCT 116721 ||| || ||||| ||||| || ||| || | || | || || || || || | Sbjct 60796 GTGGTACAGAGCCTCGAACTCCTC-GCCATAGACGTCGGCAAGGCC-GGGGCATTCGGCG 60739 Query 116722 GGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 116781 || || | |||||||| | || || ||| || ||||||||||| ||||| |||||| Sbjct 60738 GGGCACATAAGAGACCACTCGCCGTTCTGCTCGACTCGCTTCATGAACAGGTCCGGGATC 60679 Query 116782 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 116841 ||||| || ||||||| || || ||| | ||||| | || || || || | Sbjct 60678 CAGAGAGCGTAGAAGAGCTCACGGGCGCGGACCTCTTCCTTGCCATGGTTCTTGCGGAGG 60619 Query 116842 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTG 116901 || | || || | || |||| |||||| || || | ||| | || | | | || | Sbjct 60618 TCGAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCGATGTAGATGGC-AAAGGCACCGGG 60560 Query 116902 CGAC----GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGG 116957 | | ||| | |||| |||||||| || || ||| | || || ||||| || Sbjct 60559 CCGCTTGTTGCCACCTTGGTCGACATACCTTGCGGTGTTGTTGTAGACTCGGAGCATGGG 60500 Query 116958 AATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATC 117017 | ||| || | || || || || || ||| || | || | | | Sbjct 60499 CACGATGCCGTTGGAGACACCGTTGGTACCGGCAATGTATGAACCGGTGCCACGAATGCA 60440 Query 117018 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACT 117077 |||||||| | ||| || || || || ||| ||| ||||| | |||| | Sbjct 60439 GTGGATGTTGAGACCGATGCCACCGGCTGTCTTGCTGATCATGGCGCAGGTCTTGAGGGT 60380 Query 117078 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 117137 | ||||||| || ||||| ||||| |||| | | || ||||||||| ||||||||| Sbjct 60379 GTCGTAGATGCCCTCGATGGAGTCGTCCTTCATGGTGACGAGGAAGCATGACGACATTTG 60320 Query 117138 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGG 117196 || | ||||| || || |||||||| || || | || ||| |||| ||| | | | Sbjct 60319 CGGGTTGGGTGTGCCGGCATTGAAGAGCGTCGGCGAGGCATGGGTGAA-GTACTTCTCCG 60261 Query 117197 ACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGA 117256 ||||| | ||| ||||| | | | ||||| | ||||||||||||| | | Sbjct 60260 ACATCAAGTTGTATGTCTCAATCGCCTTGTCGATGTCATTGCCGTGAATACCGACAGCAA 60201 Query 117257 CCCGCATAAACATGT 117271 | ||||| | ||||| Sbjct 60200 CACGCATGAGCATGT 60186 >seq206 Length=170121 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | |||||||| ||| ||| || || || |||||| || || Sbjct 151457 GCAAAGTCGGTGTGCAAGCCCTCGTCTCGGCTGATCAGCTCGTTGGAGAAGGTGAGGCCG 151516 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| ||||| |||||||| | ||||||||| | || ||||| ||||||||||| Sbjct 151517 GGCATCAGACCGCGCTTCTTGAGCCAGAAAATGGACGCGAAGGAGCCGGAGAAGAAGATG 151576 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAA 127677 ||||| || || || |||| || ||||| || || Sbjct 151577 CCCTCGACGGCAGCAAAGGCAACGAGGCGCTCCGCGAA 151614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504661613960