Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq130 194 3e-44 seq206 122 1e-22 >seq130 Length=202609 Score = 194 bits (214), Expect = 3e-44 Identities = 454/680 (67%), Gaps = 10/680 (1%) Strand=Plus/Minus Query 203845 CACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTT 203904 |||||||||||| || ||||| | || |||| | | | || |||||| |||| ||||| Sbjct 61951 CACCGTGAACTGGATCGCGTTGGCCGCGGGCCGGGTACGGAGGTAGTACGTGCCCGTCTT 61892 Query 203905 TAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGC 203964 || ||||||| ||||||||| | ||||||| | ||| | || | ||| | Sbjct 61891 GAGACCCTTCTTCCACCCGTAGAAGTGCATGCTCGTCAGCTGGCCAAACGAGGGCGCTTG 61832 Query 203965 CATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATAT 204023 || ||| ||||| ||| |||| ||| | ||| ||||| || || |||||||| | Sbjct 61831 CAGGTGGATGTTGAGACTCTGGGACTGGCACAC-AAACGCGCCACGGTCGGCGGCCATGT 61773 Query 204024 TGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTGAG 204083 ||| || ||||||||| |||||||||||||||||| | | | | || | | | | Sbjct 61772 CGATGATCACCTTCTGCGAGATCTCCCACACCGTCTTGTAGAGGGCCTTGATCCGGTCGG 61713 Query 204084 GCACATCTTCC---CACGTCCTGA-TCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTC 204139 | | | || ||||| ||| ||||||| || || || | | || || || Sbjct 61712 GGA----TCCCGGGCACGTTTTGAATCGAGCCACCGTGTGCAATGATGCGGTTCTTCATC 61657 Query 204140 TCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGA 204199 | || ||| | ||| | || ||||| || | ||| ||||||| | ||| Sbjct 61656 TGTTCGTTCCATAGGCCTTGCTCGACGAGCTCACGGAGCAGCCATGGGTTGACCACCTGG 61597 Query 204200 AAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCG 204259 || || |||| ||||| | |||||| | |||||| | ||| | || || || |||| Sbjct 61596 AACTCGCCGGCGAGCACACGGCGGGTGTAGAGGTTGCTCGTGTACGGCTCAAAGCACTCG 61537 Query 204260 TTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTG 204319 ||| ||||| |||||| || ||||| ||||| || || || || || ||||| Sbjct 61536 TTGAAGCCGAGGATCTGACTCGTAGACGCCGTCGGCATCGGTGCGAGCAGAAGCGAGTTT 61477 Query 204320 CGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGT 204379 |||| ||||| | | | ||||||| || || |||||| || | ||||| Sbjct 61476 CGCAGACCGTGGGTCGCAATCTTGCGCTTGAGCTCGGCCCAGTCCCACAGGGAGCTGGGC 61417 Query 204380 TTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTC 204439 | || ||||| | |||| |||| | ||| || ||| |||||||||||| ||||||| Sbjct 61416 GTGACACCCCAGAGGTCGTACTGGAGCTCGCCCTGGCTGGCTGGGCTGCCCTCGTACGTC 61357 Query 204440 GGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGTACATG 204499 || || | ||| | ||| | || ||||||| | | |||| | ||| ||| Sbjct 61356 TCGTACGGGCCAAGCTCCTTTGCAATCTCGCACGAGCGCTCGAGGGCGGCGTGGTAGATG 61297 Query 204500 GTCTCAAAGATCTGAACGTT 204519 ||||| ||||| |||| ||| Sbjct 61296 GTCTCGAAGATTTGAATGTT 61277 Score = 122 bits (134), Expect = 1e-22 Identities = 556/866 (64%), Gaps = 22/866 (3%) Strand=Plus/Minus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 ||| | |||||| ||||| | ||| |||||| | || | | || |||||| || Sbjct 60982 CTCAATGATCTCCGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGA 60923 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TC 205001 ||||||||| | ||||||||| | |||||| || | || ||||| |||||| || Sbjct 60922 CTTGCGGTTGGCAGCGTCCTTGTAGAGCATGAATGGGTTGCCAGTCTCCGTCTGAGCCTC 60863 Query 205002 GCAGAATGTGGGTCCACAATTCGCGAGCCTCCACT-TGCTTCACGTACATCCCTTGAGAC 205060 | || || | ||| | | | |||| || ||| | | | |||| | | | Sbjct 60862 G-AGGATAGCGTACCAGAGCTTCTGGGCCTTGACCGTGCGGCGGGCCCGGCCCTCGCG-C 60805 Query 205061 TCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACAT 205120 ||||| || |||||| ||| | || || || || ||||| || || || ||| Sbjct 60804 TCGTACTTGTGGTACAGAGCCTCGAACTCCTCGCCATAGACGTCGGCAAGGCCGGGGCAT 60745 Query 205121 TTTTTGGGACACATCAGAGACCACAT-CTGATCGTCTTTCACCCTCTCCATAAACAGGTC 205179 | ||| ||||| ||||||||| | | || || || | || ||| |||||||| Sbjct 60744 TCGGCGGGGCACATAAGAGACCACTCGCCGTTCTGCTCG-ACTCGCTTCATGAACAGGTC 60686 Query 205180 GCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTT 205239 |||||| || |||| || || |||||||| | | | || | ||| ||||||| Sbjct 60685 CGGGATCCAGAGAGCGTAGAAGAGCTCACGGGCGCGGACCTCTTCCTTGCCATGGTTCTT 60626 Query 205240 TTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTGC 205299 | ||| || | | | ||| | |||||| ||||| | | | ||| | || Sbjct 60625 GCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCGATGTAGATGGCAAAGGC 60566 Query 205300 GCCTGGCCTCTTGTTCCCACCCTGGTCCAC----CATGCGAGTCATCGCGTTGAAAACTC 205355 || |||| |||||| ||||| ||||| || | |||| || | |||| | |||| Sbjct 60565 ACCGGGCCGCTTGTTGCCACCTTGGTCGACATACCTTGCG-GTGTT---GTTGTAGACTC 60510 Query 205356 GCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAG 205415 | ||||| ||||| | ||||||| | ||||| || | | ||| || || Sbjct 60509 GGAGCATGGGCACGATGCCGTTGGAGACACCGTTGGTACCGGCAATGTATGAACCGGTGC 60450 Query 205416 CCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCAC- 205474 | | | | | |||| || || || || | |||| |||| |||||| Sbjct 60449 CACGAATGCAGTGGATGTTGAGACCGATGCCACCGGCTGTCTTGCTGATCATGGCGCAGG 60390 Query 205475 TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCAC 205534 ||||| || ||| ||||||||| ||||||| |||||| || || || || |||| Sbjct 60389 TCTTG-AGGGTGTCGTAGATGCCCTCGATGGAGTCGTCCTTCATGGTGACGAGGAAGCAT 60331 Query 205535 GAAGCCAGCTTGGCAAAGTTGG---TGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTG 205591 || | || || || ||||| |||| || | ||||||||| || ||| ||| || Sbjct 60330 GACGACA--TTTGCGG-GTTGGGTGTGCCGGCATTGAAGAGCGTCGGCGAGGCATGGGTG 60274 Query 205592 AAGCGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATCGAAGCCGTGA 205651 ||| |||||| || | |||| ||||| | | | | || | || ||||||| Sbjct 60273 AAGTACTTCTCCGACATCAAGTTGTATGTCTCAATCGCCTTGTCGATGTCATTGCCGTGA 60214 Query 205652 ATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCATCACCCTCTCGTTCACC 205711 ||||| | || | | ||||| | ||| ||||| ||||| |||| | |||| | | Sbjct 60213 ATACCGACAGCAACACGCATGAGCATGTGCTGAGGCCTCTCGGCCACCTTGCCGTTGATC 60154 Query 205712 TTGAGCAGATAGGCTCTCTCTAGGGT 205737 ||||||| || | | ||| ||||| Sbjct 60153 CTGAGCAGGTACGAGCGCTCGAGGGT 60128 >seq206 Length=170121 Score = 122 bits (134), Expect = 1e-22 Identities = 316/478 (66%), Gaps = 9/478 (2%) Strand=Plus/Plus Query 159656 AAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTCTTCACG 159715 || ||||| |||||||||| || || || ||||| || |||| ||||| || || Sbjct 151190 AAGAAGTTCGTCTTGCCCTGCAAAGAGATGTTCTCCATAAAGTCGAACGGGTTGCTCGCG 151249 Query 159716 TGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCGATGTAG 159775 | ||| |||| ||||| | | |||| | ||| || || || |||||||| Sbjct 151250 TTGTAGTGCTTGTCGTTGCCGAGCGAAACGAGCAGGCGGTCGGCAACGAACTCGATGTAC 151309 Query 159776 CTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGACAGAAAC 159835 | ||| || |||| || || | ||| ||||||||||| || | || || Sbjct 151310 TGGCTCATGAGCCGCGAGTTCATGCCGATGAGCGAGACGGGGAGCGCGTCGGTGAGGAAG 151369 Query 159836 TCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGAC-ACGTTCG--TACCCCGGC 159892 ||| ||| || || || ||||| | || | ||| |||| || | | || Sbjct 151370 GCCTGCTCGATGGTCACAGCCTCGGTGATGATGCGGAGGACGACGTCCGGGTGGGGCCGC 151429 Query 159893 TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCC 159952 || | | |||| | ||||||||||| ||||||||| ||||| |||||||| Sbjct 151430 TTTCGGAG---GTGGC---TGAACAGGAGGCAGGCAAAGTCGGTGTGCAAGCCCTCGTCT 151483 Query 159953 CGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAA 160012 || ||| | ||||||||| | | ||||||| ||||| | || ||| |||||||| Sbjct 151484 CGGCTGATCAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGACCGCGCTTCTTGAGCCAG 151543 Query 160013 AAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGC 160072 ||||||| ||| || | ||| || ||||| ||||| ||||| ||||| || ||||| Sbjct 151544 AAAATGGACGCGAAGGAGCCGGAGAAGAAGATGCCCTCGACGGCAGCAAAGGCAACGAGG 151603 Query 160073 CTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCT 160130 | ||| | || | | || ||||| | |||| | ||||| || ||||||| Sbjct 151604 CGCTCCGCGAACGTCGAGTCCGTGTCGGAGATCCATCGGAGAGCCCAGTCGGCCTTCT 151661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795151910045360