Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq54 416 4e-111 seq150 122 1e-22 seq203 118 1e-21 >seq54 Length=394963 Score = 416 bits (460), Expect = 4e-111 Identities = 1034/1554 (67%), Gaps = 32/1554 (2%) Strand=Plus/Minus Query 6581 TTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTA 6640 || ||||| || || || | |||||| || ||||| || || || || | ||||| Sbjct 2065 TTGTACTTCTCGGCCTCGTTGACCATGCGCTCGATGTCGTCCTTGGACAACCGGCCCTTG 2006 Query 6641 TCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTC 6700 || || |||||||| ||||| | || || || | | ||| || | || || || Sbjct 2005 TCGTTGGTAATCGTGATCTTCTGAGACTTGCCAGTAGTCTTGTCGGCGGCCGACACGTTG 1946 Query 6701 AAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCG 6760 | ||| || || || || ||||| | || | || || || ||| | || ||| Sbjct 1945 AGAATCGAGTTGGCGTCGACGTCGAAGGTAACCTCGATCTGAGGCACACCACGGGGCGCG 1886 Query 6761 GCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGT 6820 || ||||| || | | || || | || || | |||| ||| | | | ||| Sbjct 1885 GCAGGAATGCCAGAGAGCTCGAACTTGCCGAGGAGGTTGTTGTCCTTGGTCCGTGCACGC 1826 Query 6821 TCACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGA 6878 || || || || || | ||| | ||||| ||||| || || || ||||||| Sbjct 1825 TCGCCCTCGTATACCTGAATCAAGACACCG--GGTTGGTTGTCGGCGTAGGTCGAGAAGA 1768 Query 6879 TTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCAC 6938 | | ||||| | || | |||||| || | | || | ||| || | | ||||| Sbjct 1767 TCTCCGACTTCTTGGTCGGCACCGTCGTGTTGCGCTTGATGAGCGGCGTGAAGACACCAC 1708 Query 6939 CCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAG 6998 | || |||| || | |||| || | ||||| | || | ||||||||| Sbjct 1707 CGGCTGTCTCGATACCCATGGACAACGGGGCGACGTCGAGAAGGAGCAGGTCTTGGGTC- 1649 Query 6999 ATTCGTTCCCT----TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACC 7054 ||| ||| ||||| | | |||||| || || || | || ||||| ||||| Sbjct 1648 -TTC--TCCGAGGTGTCACCGCTGAGGATGGCAGCCTGAACGGCAGCACCGTAGGCGACG 1592 Query 7055 GCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATC-CGATAACAT 7113 ||||| || ||||| |||| || || | || ||||| || | || ||| | | Sbjct 1591 GCCTCGTCCGGGTTGATCGACTTGTTGGGCTCCCGGCCGTTGAAGAAGTCACGA-AGGAG 1533 Query 7114 TTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGA 7173 | |||| || || || ||||| |||||||| | |||||| || | || Sbjct 1532 CTTCTGAACACGAGGAATACGCGTCGAACCACCGACGAGAACGATCTCGTGGACGGCGCC 1473 Query 7174 TTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACG-GAACA 7232 || || ||||| ||||| || || || ||||| || || || | | || ||| | Sbjct 1472 CTTGTCTATCTTGGAGTCGCGGAGCACCTTCTCGACGGGCTCGATGG-TGTGCGAGAAGA 1414 Query 7233 AGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGT 7292 ||| || || ||||| || || |||||||| ||| || ||||| || | ||| | Sbjct 1413 GGTCACCGCAGAGCTCCTCGAAGCGAGCACGGGTGATGCTAGTGTAGAAGTCGATGCCCT 1354 Query 7293 CGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGC 7352 || | | ||| || || || ||||| || || || | ||| || | || ||||| || | Sbjct 1353 CGAAGAGCGAGTCGATCTCGATGGTAGTCTGAGCAGCCGAGGACAGAGTGCGCTTCGCAC 1294 Query 7353 GCTCACACGCCGTTCGTAAACGACGAAGGGCACG---CGGGTTACCGGAAATATCTTTCT 7409 ||||| ||| || || | |||||| | |||||| || | | | ||| || |||| Sbjct 1293 GCTCAGCCGCAGTGCGGAGACGACGGACGGCACGAGCCGAGGTC---GTAATGTCCTTCT 1237 Query 7410 TATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCAC 7469 | | || || || ||||| | |||||| | ||| | ||||| || |||| Sbjct 1236 TGTTCTTGCGCTTGAACTCCTGGACGAAGTGCGTGACGAGACGGTTGTCGAAGTCCTCAC 1177 Query 7470 CACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTA 7529 |||||||||| || || || ||||| || ||||| || || ||||| | |||||| | | Sbjct 1176 CACCCAAGTGGGTGTCACCAGCGGTAGCCTTGACCTCGAAAATACCCTCCTCAATGGTGA 1117 Query 7530 ACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGT 7589 || || ||||| || ||||| ||||| ||||| || ||||| |||||| | ||| ||| Sbjct 1116 GCAGGGAGACATCGAAGGTACCGCCACCAAGGTCGAAGATGAGCACGTTCTTCTCGCCGT 1057 Query 7590 CTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA 7649 | ||||| |||||||||||||| ||||| || || || || || || || ||||| | Sbjct 1056 CGCCCTTCTTGTCGAGACCGTACGCAATAGCAGCGGCGGTGGGCTCGTTGATGATACGCA 997 Query 7650 -GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTA 7708 ||| ||| || || ||||| || | || || || || || || ||||| |||||||| Sbjct 996 TGAC-GTTGAGACCGGCAATTGTGCCGGCGTCCTTGGTAGCCTGGCGTTGGGAATCGTTG 938 Query 7709 AAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCG 7768 ||||||||||| || || ||||| |||||| |||| | |||||| || | || || Sbjct 937 AAGTAGGCCGGCACTGTGACGACGGCGTCCTTGACCGTTCCACCGAGGTAAGCCTCGGCA 878 Query 7769 ATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTT 7828 | || ||| ||||| || ||||| || |||||||| |||| | || || || Sbjct 877 GTCTCGCGCATCTTGGTGAGGACCATGGAAGAAATCTCCTCAGGAGTGAAGGTCTTGGTC 818 Query 7829 TCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGG-GGATAACCTTATA 7887 || ||| | || || | ||| ||||| || || | | || || ||||| | Sbjct 817 TCGCCGCGGTACTCGACCTGAATGATGGGCTT----GCCACCCTGGTCGACGACCTTGAA 762 Query 7888 CGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACG 7947 | ||| | ||||| ||| || |||| ||| | |||||| | ||||| | || Sbjct 761 GGGCCAGTGCTTCATGTCGGACTGCACCTCCGCGTCGGCAAACTTGCGGCCGATCAAGCG 702 Query 7948 CTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCC 8007 ||| || || || || ||||| | |||||||| || ||||||||||| || ||||| || Sbjct 701 CTTGGCGTCGAAGACGGTGTTGTGAGGGTTCATCGCCGTTTGGTTCTTGGCGGCGTCGCC 642 Query 8008 GATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTG 8067 ||| | || || || || ||||||||||| || || || || || || ||||| Sbjct 641 GATCAACCGCTC---CGAGTCGGTGAACGCGACGTATGAGGGCGTGGTCCGGTTACCTTG 585 Query 8068 GTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATA 8121 |||||| || || | || |||||||| |||||||||||| ||||||| || || Sbjct 584 GTCGTTGGCGATGACCTCGACGCGGTCATTTTGCCAGACGGCGACGCATGAGTA 531 >seq150 Length=639408 Score = 122 bits (134), Expect = 1e-22 Identities = 239/353 (68%), Gaps = 3/353 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || ||||||| ||| || || || ||||| || || || || | || Sbjct 366164 TCGAAGTCCTCGCCACCCAGGTGGGTGTCACCGGCGGTGGCAAGCACCTCGAAAACGCCG 366223 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | ||| ||||| |||||||||||||||| ||| | | || | Sbjct 366224 TCCTCGATGGAAAGGAGCGAGACATCGAACGTACCACCACCCAAGTCGTAGACGATGATC 366283 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | || ||| || | || ||| || |||||||||||||| || || ||||| || || Sbjct 366284 TGCGACTCGCCGCCCTT---CTTGTCAAGACCGTACGCGATGGCAGCGGCCGTGGGCTCG 366340 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | ||| || | | | | || || ||||| || | || || || || || || || Sbjct 366341 TTGACAATGCGCATAACGGTGAGACCGGCAATCGTGCCGGCGTCCTTGGTGGCCTGACGC 366400 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||| ||||| || ||||| |||| ||||| | || || Sbjct 366401 TGGGCGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTGGGTGACGGGGTGGCCCAGG 366460 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || | || ||| | || ||||| || || ||||| | || ||||| || Sbjct 366461 TAGGCCTCGGCGGTCTCCTTCATCTTCTGGAGGACCATGGCGGAGATCTCCTC 366513 >seq203 Length=152646 Score = 118 bits (130), Expect = 1e-21 Identities = 282/426 (66%), Gaps = 8/426 (2%) Strand=Plus/Minus Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||| ||||| |||||||| ||| | | ||| || | ||||| | | | ||| || Sbjct 47272 TCCTCGAAACGGGCACGGGTGATGCTGGCCTGGAAGTCGATGCCGTTGGAGAGCGAGTCG 47213 Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366 | || | ||| || || | ||| || | || ||||| || ||||| || || | Sbjct 47212 ACCTCGACGGTGGTCTGGGTGACCGAGGACAGTGTCCGCTTCGCACGCTCGCAGGCGGAC 47153 Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426 || || || || | |||||| | | || ||| || ||| | || || | ||| Sbjct 47152 CGCAACCGCCGGATGGCACGGGCATCGTCGCCAATCTCGACCTTGTTCTTGCGCTCGAAC 47093 Query 7427 TCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCC 7486 || | |||||| |||||| || || || ||||| |||||||| || || Sbjct 47092 TCCTTCTTGAAGTGCTCAAGGAGAGCATTGTCAAAGTCCTCACCGCCCAAGTGCGTGTCA 47033 Query 7487 CCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAAC 7546 || || || || ||||| | |||| || || ||||| | | ||| ||||| ||| Sbjct 47032 CCGGCCGTGGCCTTGACGGCGAAGACGCCACCGGTGATGTTGAGGAGCGAGACATCGAAC 46973 Query 7547 GTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC----GTCGTCTTTGTTCTTATC 7602 || ||||| || ||||| || ||||| |||||| | || | || ||| | || Sbjct 46972 GTGCCACCGCCGAGGTCGAAGATGAGCACGTTCTTCTCTGCCGACGACTTGGAG----TC 46917 Query 7603 GAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCC 7662 ||||||||||||||| || || ||||| || || || || ||||| || || || || Sbjct 46916 GAGACCGTACGCGATGGCGGCGGCCGTGGGCTCGTTGATGATACGGAGGACGTCGAGACC 46857 Query 7663 AGCAAT 7668 ||| || Sbjct 46856 AGCGAT 46851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635130172138040