Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq130 185 1e-41 seq206 113 6e-20 >seq130 Length=202609 Score = 185 bits (204), Expect = 1e-41 Identities = 900/1409 (64%), Gaps = 51/1409 (4%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| || || ||||||| || || | || || || | Sbjct 60179 CCTCAGCACATGCTCATGCGTGTTGCTGTCGGTATTCACGGCAATGACATCGACAAGGCG 60238 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||||||| || |||||| | ||| |||| ||| || | || || ||||| Sbjct 60239 ATTGAGACATACAACTTGATGTCGGAGAAGTAC-TTCACCCATGCCTCGCCGACGCTCTT 60297 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 ||| || || ||||| | || |||||||| || ||||| | | | ||||| || Sbjct 60298 CAATGCCGGCACACCCAACCCGCAAATGTCGTCATGCTTCCTCGTCACCATGAAGGACGA 60357 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || ||| | ||||| |||| ||| |||| || ||| ||| ||| || || Sbjct 60358 CTCCATCGAGGGCATCTACGACACCCTCAAGACCTGCGCCATGATCAGCAAGACAGCCGG 60417 Query 111851 TGGTATCGGGATGCACATCCA-TGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAA 111909 ||| ||||| | ||||||| || || | | || | || ||| ||||| | Sbjct 60418 TGGCATCGGTCTCAACATCCACTGCATTC-GTGGCACCGGTTCATACATTGCCGGTACCA 60476 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 | ||| || | || || | || ||||| || || | ||| ||| || | |||| Sbjct 60477 ACGGTGTCTCCAACGGCATCGTGCCCATGCTCCGAGTCTACAACAACACCGCAAGGTATG 60536 Query 111970 TAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 112023 | |||||| ||| ||| | | || | | || |||| | ||||| |||| Sbjct 60537 TCGACCAAGGTGGCAACAAGCGGCCC---GGTGCCTTTGCCATCTACATCGAGCCCTGGC 60593 Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGT 112083 || |||| || | |||||||| || | || ||||| || | || |||| || Sbjct 60594 ACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCATGGCAAGGAAGAGGTCCGCG 60653 Query 112084 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143 ||| || ||||||| |||||||||||| || || || ||||||||| |||| ||| ||| Sbjct 60654 CCCGTGAGCTCTTCTACGCTCTCTGGATCCCGGACCTGTTCATGAAGCGAGTCGAGCAGA 60713 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGGGT 112202 ||| | |||||||| | || || | | || || ||||| || |||| | | || Sbjct 60714 ACGGCGAGTGGTCTCTTATGTGCCCCGCCGAATGC-CCCGGCCTTGCCGACGTCTATGGC 60772 Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGG-CGACTGCGACGGT 112261 |||||||| || || || ||| ||||||||| || | |||| | | || ||||| Sbjct 60773 GAGGAGTTCGAGGCTCTGTACCACAAGTACGAGCGCGAGGGCCGGGCCCGCCGC-ACGGT 60831 Query 112262 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 | || | || | | ||| | ||||| ||| || |||| || |||||||| | |||| Sbjct 60832 -CAAGGCCCAGAAGCTCTGGTACGCTATCCTCGAGGCTCAGACGGAGACTGGCAACCCAT 60890 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 ||||| ||||| ||||| |||| ||| || || ||||| | || |||| Sbjct 60891 TCATGCTCTACAAGGACGCTGCCAACCGCAAGTCGAACCAGAAGAACCTCGGCACCATCA 60950 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 || | || |||||||| || || ||| | || | | | | |||||| || || | Sbjct 60951 AGTGCTCGAACCTCTGCACGGAGATCATTGAGTACAGTGCCCCTGATGAGGTCGCCGTCT 61010 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGT------GGATCCAGAGA------CAA 112488 | ||||| || ||||| || |||| || | |||||| |||| ||| Sbjct 61011 GCAACCTGGCCAGTATCGCGCTTCCCACCTACATCAAGCCGGATCCCGAGACCGGTGCAA 61070 Query 112489 AGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACA 112548 ||| | || | | | || || ||||| ||||| || || ||| | |||| Sbjct 61071 GGACGTACGACTTTAAGAAGCTGCACGAGGTTACCAAGGTCGTGTGTGCCAACTTGAACA 61130 Query 112549 GAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGAC 112605 | || || || | ||||| || ||| || || || || ||| | | Sbjct 61131 AGATCATCGACGTCAACTACTACCCTGTGCCCGAG---GCCAAGAAGTCGAACATGCGCC 61187 Query 112606 ACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT--TCTTTGTCGCCA 112663 ||||||| || || | |||||| | ||||| || || | |||||| || | | || | Sbjct 61188 ACCGTCCCATCGGCATTGGTGTCAACGGTCTTGCCGACGCATTCATGATCATGG--GCTA 61245 Query 112664 CGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCA 112723 ||| || || | ||| || ||| |||| | || || ||||| || || || Sbjct 61246 CGCCTTCGACAGCCCCGAGGCCAAGAGGCTCAACATTCAAATCTTCGAGACCATCTACCA 61305 Query 112724 CGCCGCTCTTGAG-GCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTG 112782 |||||| || ||| || || | ||| | ||| ||| ||| || || || || | | Sbjct 61306 CGCCGCCCTCGAGCGCTCGTGC-GAGATTGCAAAGGAGCTTGGCCCGTACGAGACGTACG 61364 Query 112783 AGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC 112842 |||| ||||| || || | ||| || | || | |||| || | || ||| Sbjct 61365 AGGGCAGCCCAGCCAGCCAGGGCGAGCTCCAGTACGACCTCTGGG-GTGTCACGCCCAGC 61423 Query 112843 T-TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGA---AGGGTCTTCGTAAC 112898 | | | ||||||| || |||||| |||| | | || | ||||| || ||| Sbjct 61424 TCCCTGTGGGACTGGGCCGAGCTCAAG---CGCAAGATTGCGACCCACGGTCTGCGAAAC 61480 Query 112899 AGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAA 112958 ||| || | ||||| ||||| || || || || || ||| | || || || Sbjct 61481 TCGCTTCTGCTCGCACCGATGCCGACGGCGTCTACGAGTCAGATCCTCGGCTTCAACGAG 61540 Query 112959 TGCTTTGAACCCTACACGACGAACATCTA 112987 |||||||| || ||||||| ||| |||| Sbjct 61541 TGCTTTGAGCCGTACACGAGCAACCTCTA 61569 >seq206 Length=170121 Score = 113 bits (124), Expect = 6e-20 Identities = 122/159 (77%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 102174 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 102233 || || ||||| ||| | || ||||| || ||||| ||||||||||| || |||||| Sbjct 151614 TTCGCGGAGCGCCTCGTTGCCTTTGCTGCCGTCGAGGGCATCTTCTTCTCCGGCTCCTTC 151555 Query 102234 TGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 102292 ||| | |||| |||||||||||||| ||||| ||||| || ||| |||||||||||| Sbjct 151554 -GCGTCCATTTTCTGGCTCAAGAAGCGCGGTCTGATGCCCGGCCTCACCTTCTCCAACGA 151496 Query 102293 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||| ||| || |||||||| | ||| || ||||| Sbjct 151495 GCTGATCAGCCGAGACGAGGGCTTGCACACCGACTTTGC 151457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739831678320