Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq130 196 6e-45 >seq130 Length=202609 Score = 196 bits (216), Expect = 6e-45 Identities = 551/827 (67%), Gaps = 27/827 (3%) Strand=Plus/Minus Query 110330 TGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGAT 110389 |||| || | || ||||| || | ||| || | ||| ||| || | ||||||||| | Sbjct 60986 TGTACTCAATGATCTCCGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGT 60927 Query 110390 TCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTG 110449 |||| ||| |||| || ||||| ||||||||| ||||| | ||||| |||||||| | Sbjct 60926 TCGACTTGCGGTTGGCAGCGTCCTTGTAGAGCATGAATGGGTTGCCAGTCTCCGTCTGAG 60867 Query 110450 ACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCC 110508 || ||| || || | ||| | | || | ||| ||| || ||| ||| | || || Sbjct 60866 CCTCGAGGATAGCGTACCAGAGCTTCTG-GGCCTTGACCGT-GCG---GCGGGCCCGGCC 60812 Query 110509 -TC---CTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACC 110564 || |||||||||| ||||| |||| || |||| || || || || | ||| || Sbjct 60811 CTCGCGCTCGTACTTGTGGTACAGAGCCTCGAACTCCTCGCCATAGACGTCGGCAAGGCC 60752 Query 110565 CTTCGCCTT-GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGA 110623 || || | |||| || | || ||||| | || || ||| || | |||||||| Sbjct 60751 GGG-GCATTCGGCGGGGCACATAAGAGACCACTCGCCGTTCTGCTCGACTCGCTTCATGA 60693 Query 110624 ACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTT 110683 ||||||| || ||||| | || |||| || |||||| || ||||||| | || | Sbjct 60692 ACAGGTCCGGGATCCAGAGAGCGTAGAAGAGCTCACGGGCGCGGACCTCTTCCTTGCCAT 60633 Query 110684 GGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAG 110743 |||| ||| || || | || || | || ||||||||||| || |||| |||| | Sbjct 60632 GGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCGATGTAGATGG 60573 Query 110744 CGATGGATCC------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGA 110797 | | || || ||| | | || | |||| ||||| | ||| ||| ||| Sbjct 60572 CAAAGGCACCGGGCCGCTT--GTTG-CCACCTTGGTCGACATACCTTGCGGTGTTGTTGT 60516 Query 110798 AGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGAC 110856 |||| | |||||| || | || || | ||| ||| || ||||| ||| | || || Sbjct 60515 AGACTCGGAGCATGGGCACGATGCCGTTGGAGACACCGTTGGTACCGGCAATGTATGAAC 60456 Query 110857 TTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGT 110916 || |||||||| |||||| | | ||| || ||||| || ||| || || Sbjct 60455 -CGGTGCCACGAATGCAGTGGATGTTGAGACCGATGCCACCGGCTGTCTTGCTGATCATG 60397 Query 110917 GCACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAG 110975 || || ||| |||| || | || || || || || || || |||| ||| | || Sbjct 60396 GCGCAGGTCT-TGAGGGTGTCGTAGATGCCCTCGATGGAGTCGTCCTTCATGGTGACGAG 60338 Query 110976 AAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATG 111035 ||||| || ||||| || || || || || ||||||||||| || || | ||||| Sbjct 60337 GAAGCATGACGACATTTGCGGGTTGGGTGTGCCGGCATTGAAGAGCGTCGGCGAGGCATG 60278 Query 111036 AATGAACAGACCT-TGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTAC 111094 |||| || | | |||||| ||||||||| || | || | | || || | Sbjct 60277 GGTGAA-GTACTTCTCCGACATCAAGTTGTATGTCTCAATCGCCTTGTCGATGTCATTGC 60219 Query 111095 CGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCG 111141 |||||||||| | ||||| ||||||| ||| | |||||| | ||| Sbjct 60218 CGTGAATACCGACAGCAACACGCATGAGCATGTGCTGAGGCCTCTCG 60172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588973563111800