Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq130 154 2e-32 seq206 102 1e-16 >seq130 Length=202609 Score = 154 bits (170), Expect = 2e-32 Identities = 557/858 (65%), Gaps = 19/858 (2%) Strand=Plus/Minus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 ||||| ||||| |||| ||||| || || |||||| | ||||||| | Sbjct 61035 GGAAGCGCGATACTGGCCAGGTTGCAGACGGCGACCTCATCAGGGGCACTGTACTCAATG 60976 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || || | ||| || | ||| || || || | ||||| ||||| ||| | Sbjct 60975 ATCTCCGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGG 60916 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||| || ||||||||||||||| | || | || ||||||||||| | || ||| || Sbjct 60915 TTGGCAGCGTCCTTGTAGAGCATGAATGGGTTGCCAGTCTCCGTCTGAGCCTCGAGGATA 60856 Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 106695 || | ||| | | || | | || | || || | |||||| ||||| ||||||||| Sbjct 60855 GCGTACCAGAGCTTCTGGGCCTTG-ACCGTGCGGCGGGCCCGGCCCTCGCGCTCGTACTT 60797 Query 106696 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTG 106754 ||| || || || |||||||| || |||||| || || || || || | | | Sbjct 60796 GTGGTACAGAGCCTCGAACTCCTCGCCATAGACGTCGGCAAGGCCGGG-GCATTCGGCGG 60738 Query 106755 GACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCC 106814 | || | ||||||||| | || || ||| || ||||||||||| ||||| || |||| Sbjct 60737 GGCACATAAGAGACCACTCGCCGTTCTGCTCGACTCGCTTCATGAACAGGTCCGGGATCC 60678 Query 106815 ACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACT 106874 | || | | ||||| || | || ||||||| | || ||||| || | | Sbjct 60677 AGAGAGCGTAGAAGAGCTCACGGGCGCGGACCTCTTCCTTGCCATGGTTCTTGCGGAGGT 60618 Query 106875 CAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC----CC 106930 | |||||||| | || |||| |||||| ||||| | |||| || | | | || Sbjct 60617 CGAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCGATGTAGATGGCAAAGGCACCGGGCC 60558 Query 106931 TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 106990 | | | ||| |||| | ||||| | || ||| ||| | || || ||||| || Sbjct 60557 GCTTGTTG-CCACCTTGGTCGACATACCTTGCGGTGTTGTTGTAGACTCGGAGCATGGGC 60499 Query 106991 ATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC--AT 107048 | || || | || ||| || || || ||| | | | | | ||| || Sbjct 60498 ACGATGCCGTTGGAGACACCGTTGGTACCGGCAAT----GTATGAACCGGTGCCACGAAT 60443 Query 107049 -CA-TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 107106 || ||||||| | || || || || || ||| ||| || || | | || Sbjct 60442 GCAGTGGATGTTGAGACCGATGCCACCGGCTGTCTTGCTGATCATGGCGCAGGTCTTGAG 60383 Query 107107 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 107166 || | ||||| || | ||| ||||| ||||| ||| || |||||||| ||||| Sbjct 60382 GGTGTCGTAGATGCCCTCGATGGAGTCGTCCTTCATGGTGACGAGGAAGCATGACGACAT 60323 Query 107167 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-T 107225 ||||| | ||||| || ||||||||||| || || | || || |||| ||| | | Sbjct 60322 TTGCGGGTTGGGTGTGCCGGCATTGAAGAGCGTCGGCGAGGCATGGGTGAA-GTACTTCT 60264 Query 107226 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGG 107285 |||||| || ||||||||| | | || ||||| | ||||| || |||| | Sbjct 60263 CCGACATCAAGTTGTATGTCTCAATCGCCTTGTCGATGTCATTGCCGTGAATACCGACAG 60204 Query 107286 CCACACGCATAAACATGT 107303 | |||||||| | ||||| Sbjct 60203 CAACACGCATGAGCATGT 60186 >seq206 Length=170121 Score = 102 bits (112), Expect = 1e-16 Identities = 120/160 (75%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| | ||||| |||||| || || || || |||||| ||||| Sbjct 151456 GGCAAAGTCGGTGTGCAAGCCCTCGTCTCGGCTGATCAGCTCGTTGGAGAAGGTGAGGCC 151515 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGA 117391 ||||| ||||| |||||||| | ||| |||| | ||| ||| || ||||||||||||| Sbjct 151516 GGGCATCAGACCGCGCTTCTTGAGCCAGAAAATGGACGC-GAAGGAGCCGGAGAAGAAGA 151574 Query 117392 TACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAA 117431 | ||||| || ||||| |||| |||||||| ||||| Sbjct 151575 TGCCCTCGACGGCAGCAAAGGCAACGAGGCGCTCCGCGAA 151614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978358954440