Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq59 125 5e-24 seq125 111 1e-19 seq146 100 2e-16 >seq59 Length=598887 Score = 125 bits (138), Expect = 5e-24 Identities = 146/195 (75%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| |||| | || | || || ||||| || |||||||| Sbjct 73030 TCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCAAAG 73089 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || ||||||||||| |||| | ||||||||||| ||||| ||||| || Sbjct 73090 ATCAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGAC--AT 73147 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| ||||||| ||| || |||| ||| || || || |||||||| ||||| Sbjct 73148 --TGTCGATGGTGTCACCGGACTCCACCTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTT 73205 Query 34967 CACAAAGATCTGCAT 34981 || ||||||||||| Sbjct 73206 GACGAAGATCTGCAT 73220 >seq125 Length=635640 Score = 111 bits (122), Expect = 1e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | | | | || | || || ||||| || |||||||| Sbjct 378576 TCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCAAAG 378517 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||||||| |||| | ||||||||||| ||||| |||||| Sbjct 378516 ATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG 378457 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || |||| ||| || |||| ||| || || || || ||||| ||||| ||| Sbjct 378456 TCAATGGTGTCGCCGGACTCGACCTCGAGGGTGATCGTCTTGCCTGTGAGCGTCTTGACA 378397 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 378396 AAGATCTGCATCTT 378383 >seq146 Length=265622 Score = 100 bits (110), Expect = 2e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| || | || | || || ||||| || || || || Sbjct 40262 TCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAG 40321 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || ||||||||||||||| |||| | ||||||||||| ||||| |||||| Sbjct 40322 ATGAGTCGTTGCTGGTCTGGCGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG 40381 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| ||||| | ||| || |||| ||| ||||| || || || || ||||| ||| Sbjct 40382 TCGATCGTGTCACCAGACTCGACCTCGAGGGTAATGGTCTTGCCAGTCAGGGTCTTGACA 40441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632290407768