Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq117 113 4e-20 >seq117 Length=262621 Score = 113 bits (124), Expect = 4e-20 Identities = 128/172 (74%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 29798 TCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACT 29857 |||||||||||||||| || || ||||||| || || || |||| | || |||||| || Sbjct 176574 TCTTCAGCGGTTCCACATGGTCACGGTAGACATGTGCATCACCCATGCTGAGGACAAGCT 176633 Query 29858 CTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGA 29917 | || | || ||||| || | |||||||||| ||| || | | |||||| || | Sbjct 176634 CGCCTGCCTCACAGCCGGTCACCTTGGCCATCATGTGCGTCAGCAAGGCGTAGCTTGCAA 176693 Query 29918 TGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969 |||| || || || ||||| |||| ||| | ||||| ||| || | |||||| Sbjct 176694 TGTTGAACGGCACGCCGAGACCCAAGTCGCACGACCGCTGATACATCTGACA 176745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408615951611063