Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq130 407 3e-108 seq206 217 3e-51 >seq130 Length=202609 Score = 407 bits (450), Expect = 3e-108 Identities = 1125/1705 (66%), Gaps = 65/1705 (4%) Strand=Plus/Minus Query 212732 GTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTC 212791 ||| ||||||||||| ||||| | |||| |||| ||||||||| |||||| ||| | Sbjct 61786 GTCGGCGGCCATGTCGATGATCACCTTCTGCGAGATCTCCCACACCGTCTTGTAGAGGGC 61727 Query 212792 TTTGAGGTCC--TCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGTC 212846 |||| ||| || |||| ||||| | ||| || | || || | |||| ||| | Sbjct 61726 CTTGA--TCCGGTCGGGGATCCCGGGCACGTTTTGAATCGAGCCACCGTGTGCAATGATG 61669 Query 212847 AGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTG-ACCAGGTG 212905 | | | ||| | |||||||| ||||| || || | || | | | ||| Sbjct 61668 CGGTTCTT---CATCTGTTCGTTCCATAGGCCT-TGCTCGACGAGCTCACGGAGCAGCCA 61613 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 |||||||| | |||||| || || | |||||| | | ||| | ||| ||||| Sbjct 61612 TGGGTTGACCACCTGGAACTCGCCGGCGAGCACACGGCGGGTGTAGAGGTTGCTCGTGTA 61553 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 ||||| | || ||||||| || || ||||| || || || ||||| || || Sbjct 61552 CGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTCGTAGACGCCGTCGGCATCGGTGC 61493 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGC-TCGCCGATGAGGCGCCGAAGCTCTGCCCAGT 213084 | ||| || ||| | || ||||| |||| || |||| ||||| ||||||| Sbjct 61492 GAGCAGAAGCGAGTTTCGCAGACCGTGGGTCGCA-ATCTTGCGCTTGAGCTCGGCCCAGT 61434 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 |||| ||| || | ||| ||| ||| | ||| |||| | ||| | Sbjct 61433 CCCA-----CAGGGAGCTGGGCGTGA--CACC--CCAGAGGTCGTACTGGAGCTCGCCCT 61383 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 ||| | |||||||||| ||| | ||| |||||| ||||||| || | |||||| | Sbjct 61382 GGCTGGCTGGGCTGCCCTCGTACGTCTCGTACGGGCCAAGCTCCTTTGCAATCTCGCACG 61323 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 | || ||||| |||| ||||||||| || || || | |||||||| ||||||||| Sbjct 61322 AGCGCTCGAGGGCGGCGTGGTAGATGGTCTCGAAGATTTGAATGTTGAGCCTCTTGGCCT 61263 Query 213265 CTGGGGACGT-GAAGGG------CATCATCATGCGTTGGAACACATCAGCCAGCCCCTGG 213317 | |||| || ||||| ||| |||||| || | || || || || | | Sbjct 61262 C-GGGGCTGTCGAAGGCGTAGCCCATGATCATG------AATGCGTCGGCAAGACCGTTG 61210 Query 213318 ACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAA 213377 || || ||||||||||| | ||| | || ||| ||||| | ||| || ||||| Sbjct 61209 ACACCAATGCCGATGGGACGGTGGCGCATGTTCGACTTCTTGGCCTCGGGCACAGGGTAG 61150 Query 213378 AAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGG 213437 ||||| ||||||||||||||| | |||| | || ||||| || | | ||| Sbjct 61149 TAGTTGACGTCGATGATCTTGTTCAAGTTGGCACACACGACCTTGGTAACCTCGTGCAGC 61090 Query 213438 TACT----------CGTGATTGAACACGTAGCCC---CCGTCCTGCACAAACTCAGGCAG 213484 | || ||| ||| || || | ||| | || | | || || Sbjct 61089 TTCTTAAAGTCGTACGTCCTTGCACCGGTCTCGGGATCCGGCTTGATGTAGGTG-GGAAG 61031 Query 213485 GGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTC 213544 ||||| |||||||||||||| ||||| ||||| | || | | ||||||| |||||||| Sbjct 61030 CGCGATACTGGCCAGGTTGCAGACGGCGACCTCATCAGGGGCACTGTACTCAATGATCTC 60971 Query 213545 GGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGC 213604 ||||| ||||| ||| ||||||||| ||||||| ||||| ||||| |||||| Sbjct 60970 CGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGC 60911 Query 213605 AGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT 213664 || ||||||||||||||| | ||| || ||||| ||| | | | || || | Sbjct 60910 AGCGTCCTTGTAGAGCATGAATGGGTTGCCAGTCTCCGTCTGAGCCTCGAGGATAGCGTA 60851 Query 213665 CCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTT 213723 |||||| | | |||||||||| || | | | |||| | | || |||||||| | Sbjct 60850 CCAGAGCTTCTGGGCCTTGACCGTGCGGCGGGC----CCGGCCCTCGCGCTCGTACTTGT 60795 Query 213724 CGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGAC 213783 ||| || | | ||| || | ||| |||| | | || || || || ||||| | Sbjct 60794 GGTACAGAGCCTCGAACTCCTCGCCATAGACGTCGGCAAGGCCGGGGCATTCGGCGGGGC 60735 Query 213784 ACATGAGGCTCCAGTCCCCG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCAC 213842 |||| || ||| || ||| || ||| ||||| || ||||||||||||||||| ||| Sbjct 60734 ACATAAGAGACCACTCGCCGTTCTGCTC-GACTCGCTTCATGAACAGGTCCGGGATCCAG 60676 Query 213843 AGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCT 213902 || ||| ||| || || | || | ||| ||| ||| ||| ||||| || || Sbjct 60675 AGAGCGTAGAAGAGCTCACGGGCGCGGACCTCTTCCTTGCCATGGTTCTTGCGGAGGTCG 60616 Query 213903 AGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCC-- 213960 || || ||||||| ||||| |||||| ||||| ||||||||||||||||| || |||| Sbjct 60615 AGGAACTCAAAGACGTCCGAGTGCCAGGGCTCGATGTAGATGGCAAAGGCACCGGGCCGC 60556 Query 213961 -TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACC 214019 | ||||| || ||||| || ||| || ||||| ||| || || | ||| || Sbjct 60555 TTGTTGCCACCTTGGTCGACATACCTTGCGGTGTTGTTGTAGACTCGGAGCATGGGCACG 60496 Query 214020 AGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTC 214079 | |||||||| |||||||| || || || || || |||| | | | | | | Sbjct 60495 ATGCCGTTGGAGACACCGTTGGTACCGGCAATGTATGAACCGGTGCCACGAATGCAGTGG 60436 Query 214080 ATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCC 214139 ||| ||| || ||||||||||| |||| ||||||||||||| | | | || || Sbjct 60435 ATGTTGAGACCGATGCCACCGGCTGTCTTGCTGATCATGGCGCAGGTCTTGAGGGTGTCG 60376 Query 214140 ATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGC 214199 |||||| | ||| ||| || | | | | | | |||||| ||| | || || Sbjct 60375 TAGATGCCCTCGATGGAGTCGTCCTTCATGGTGACGAGGAAGCATGACGACATTTGCGGG 60316 Query 214200 CTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGG 214259 ||| | ||| | ||||| ||||| || ||||||| | | |||| | || | Sbjct 60315 TTGGGTGTGCCGGCATTGAAGAGCGTCGGCGAGGCATGGGTGAAGTACTTCTCCGACATC 60256 Query 214260 AGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTC 214319 | |||| ||||| | | | |||||| | ||| || | ||| | | Sbjct 60255 AAGTTGTATGTCTCAATCGCCTTGTCGATGTCATTGCCGTGAATACCGACAGCAACACGC 60196 Query 214320 ATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTT--TGGGGCCCTTGAGCAGGTAGGAGC 214377 || ||||||||||| |||||||| | |||| | | | |||||||||| |||| Sbjct 60195 ATGAGCATGTGCTGAGGCCTCTC--GGCCACCTTGCCGTTGATCCTGAGCAGGTACGAGC 60138 Query 214378 GCTCCAGAGTCTTGAACCCAAAGTA 214402 |||| || |||||||| || ||||| Sbjct 60137 GCTCGAGGGTCTTGAATCCGAAGTA 60113 >seq206 Length=170121 Score = 217 bits (240), Expect = 3e-51 Identities = 365/522 (70%), Gaps = 7/522 (1%) Strand=Plus/Plus Query 47864 AAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGGTGTG 47923 |||||||| ||||| |||| ||| |||||||||||||| ||| ||| |||||| | | Sbjct 151190 AAGAAGTTCGTCTTGCCCTGCAAAGAGATGTTCTCCATAAAGTCGAACGGGTTGCTCGCG 151249 Query 47924 TTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGATGTA 47982 || || | |||| ||| | | | |||||| | || || ||| |||||||||| Sbjct 151250 TTGTAGTGCT-TGTCGTTGCCGAGCGAAACGAGCAGGCGGTCGGCAACGAACTCGATGTA 151308 Query 47983 TTTTGACATGAGG-GTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAGAA 48041 | |||||| | || ||||||||| ||||| || ||||| | || | ||||| | Sbjct 151309 CTGGCTCATGAGCCGCGA-GTTCATGCCGATGAGCGAGACGGGGAGCGCGTCGGTGAGGA 151367 Query 48042 ACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGGTT 48101 | ||| ||| || ||| || || | || | ||| | | ||| Sbjct 151368 AGGCCTGCTCGATGGTCACAGCCTCGGTGATGATGCGGAGGACGACGTCCGGGTGGGGCC 151427 Query 48102 TGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCC 48161 || || ||||| || | || | |||||||||||| |||||||||| ||||| | Sbjct 151428 GCTTTCGGAGGTGGCTGA---ACAGGAGGCAGGCAAAGTCGGTGTGCAAGCCCTCGTCTC 151484 Query 48162 GGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGA 48221 ||||||| ||| ||||||||||| ||| || ||||| | || | || |||||||||| Sbjct 151485 GGCTGATCAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGACCGCGCTTCTTGAGCCAGA 151544 Query 48222 AAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCC 48281 |||| | |||||| ||||| ||||||||||||||||| || || || || || ||| | Sbjct 151545 AAATGGACGCGAAGGAGCCGGAGAAGAAGATGCCCTCGACGGCAGCAAAGGCAACGAGGC 151604 Query 48282 TCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCT 48341 ||| |||| | | || | |||| |||||||| || |||||||| ||||||| || Sbjct 151605 GCTCCGCGAACGTCGAGTCCGTGTCGGAGATCCATCGGAGAGCCCAGTCGGCCTTCTGCT 151664 Query 48342 TGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGC 48383 ||| | || || ||||| ||||| |||||| | || || Sbjct 151665 TGACGACGGGGATGGTCTCAATGGCGTCGAAGAGGTACTCGC 151706 Score = 120 bits (132), Expect = 6e-22 Identities = 162/225 (72%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 48454 GATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTC 48513 ||||||||| ||||||||| | |||||| ||||||| || | | ||||| ||| Sbjct 151840 GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCGGCCTGCACCTCGGAGCTGAATCGCTC 151899 Query 48514 CAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAG 48573 | |||||||| ||||| || || || || |||||||||||||||||||| || | | Sbjct 151900 AACGAGATTCTCGTTGACGATACCGTCCGAGGCAGCAAAGAAGGCAAGGACGTGGCTGAT 151959 Query 48574 GAAATGGCGCTCGTTGTGGGTGAGAGCATT---CCAGCCCTGTACGTCTTTGCCCAGGTC 48630 ||| |||||||| |||| | |||| || |||| | || | ||| ||| || ||| Sbjct 151960 GAAGTGGCGCTCATTGTCGTTGAGCCTGTTGTCCCAGTCGTGCATGTCCTTGGACAAGTC 152019 Query 48631 CACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACAT 48675 | || || | ||||||||||| || || || |||||||| Sbjct 152020 GATCTCCTCAGCCGTCCAGAAGGAGGCCTCGGCCTTCTTGTACAT 152064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931528945783040