Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq130 149 7e-31 seq206 102 1e-16 >seq130 Length=202609 Score = 149 bits (164), Expect = 7e-31 Identities = 561/865 (65%), Gaps = 19/865 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| || || |||| || ||||| | ||||| || | Sbjct 60179 CCTCAGCACATGCTCATGCGTGTTGCTGTCGGTATTCACGGCAATGACATCGACAAGGCG 60238 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||||||| || |||||| | | ||| |||| || || | || || ||||| Sbjct 60239 ATTGAGACATACAACTTGATGTCGGAGAAGTAC-TTCACCCATGCCTCGCCGACGCTCTT 60297 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 |||||| || ||||| | ||||| ||||| |||||||| || ||| ||||| || Sbjct 60298 CAATGCCGGCACACCCAACCCGCAAATGTCGTCATGCTTCCTCGTCACCATGAAGGACGA 60357 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 ||| ||| | || ||||| | || || | | || || ||| ||| || || Sbjct 60358 CTCCATCGAGGGCATCTACGACACCCTCAAGACCTGCGCCATGATCAGCAAGACAGCCGG 60417 Query 75451 GGGTATTGGGATGCACATCCA-TG-AT--GTGAGAGCCAATAAATCTCGTATTCGGGGGA 75506 || || || | ||||||| || || ||| | | | | | ||| || | Sbjct 60418 TGGCATCGGTCTCAACATCCACTGCATTCGTGGCACCGGTTCATAC----ATTGCCGGTA 60473 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 | || ||| || | || || | || ||||| || || | ||| ||| || | | Sbjct 60474 CCAACGGTGTCTCCAACGGCATCGTGCCCATGCTCCGAGTCTACAACAACACCGCAAGGT 60533 Query 75567 ATGTAAATCAAGCGGGGCGTCGCAAGG---GGT-CCATCGCGGTCTACTTGGAACCATGG 75622 |||| | |||| | ||| | || ||| || | || ||||| | || || ||| Sbjct 60534 ATGTCGACCAAG-GTGGCAACAAGCGGCCCGGTGCCTTTGCCATCTACATCGAGCCCTGG 60592 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || | || || | |||||||| || | || ||||| || | ||||||| || Sbjct 60593 CACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCATGGCAAGGAAGAGGTCCGC 60652 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | || ||||| | | || ||||| || ||||| ||||||||||| || ||| || Sbjct 60653 GCCCGTGAGCTCTTCTACGCTCTCTGGATCCCGGACCTGTTCATGAAGCGAGTCGAGCAG 60712 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGG 75801 || | ||||||||| | || || | | || || || || || |||||| || Sbjct 60713 AACGGCGAGTGGTCTCTTATGTGCCCCGCCGAATGCCCC-GGCCTTGCCGACGTCTATGG 60771 Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGT 75861 |||||||| || || || ||| ||||| || ||||| | ||| || || Sbjct 60772 CGAGGAGTTCGAGGCTCTGTACCACAAGTACGAGCGCGAGGGCCGGGCCCGCCGCACGGT 60831 Query 75862 ACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920 | || | | || | | ||| | ||||| ||| | | |||||||||||||| | |||| Sbjct 60832 -CAAGGCCCAGAAGCTCTGGTACGCTATCCTCGAGGCTCAGACGGAGACTGGCAACCCAT 60890 Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980 ||||| |||||||| ||| ||| ||| ||||| ||||| | || || |||| Sbjct 60891 TCATGCTCTACAAGGACGCTGCCAACCGCAAGTCGAACCAGAAGAACCTCGGCACCATCA 60950 Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040 || |||| || || |||||||| || | ||||||| | |||||| || || | Sbjct 60951 AGTGCTCGAACCTCTGCACGGAGATCATTGAGTACAGTGCCCCTGATGAGGTCGCCGTCT 61010 Query 76041 GCAATTTGGCATCAATCGCCCTTCC 76065 |||| |||| ||||| ||||| Sbjct 61011 GCAACCTGGCCAGTATCGCGCTTCC 61035 >seq206 Length=170121 Score = 102 bits (112), Expect = 1e-16 Identities = 120/160 (75%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130 ||||| |||||||| |||| ||||| || ||||| |||||||||||||| || ||| Sbjct 151614 TTCGCGGAGCGCCTCGTTGCCTTTGCTGCCGTCGAGGGCATCTTCTTCTCCGGCTCCTTC 151555 Query 65131 TGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGA 65189 ||| | |||| ||| | |||||||| ||||| ||||| ||||| |||||| || || Sbjct 151554 -GCGTCCATTTTCTGGCTCAAGAAGCGCGGTCTGATGCCCGGCCTCACCTTCTCCAACGA 151496 Query 65190 ACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 || || |||||| ||||| | ||| || |||||| Sbjct 151495 GCTGATCAGCCGAGACGAGGGCTTGCACACCGACTTTGCC 151456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567131693280