Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq54 533 2e-146 seq146 183 4e-41 seq59 168 9e-37 seq125 156 6e-33 seq41 149 8e-31 seq150 95.1 2e-14 >seq54 Length=394963 Score = 533 bits (590), Expect = 2e-146 Identities = 1059/1558 (68%), Gaps = 15/1558 (1%) Strand=Plus/Plus Query 195326 TACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGA 195385 |||||||| || | || ||||||||||| || || ||| | ||| | || |||||||| Sbjct 531 TACTCATGCGTCGCCGTCTGGCAAAATGACCGCGTCGAGGTCATCGCCAACGACCAAGGT 590 Query 195386 AACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCC 195445 ||||| || || || || ||||| || || || || || || | | || || ||| Sbjct 591 AACCGGACCACGCCCTCATACGTCGCGTTCACCGACTCGGAGCGGTTGATCGGCGACGCC 650 Query 195446 GCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATT 195505 || || || || || || ||||||||| ||| || ||||| ||||| ||||| | || Sbjct 651 GCCAAGAACCAAACGGCGATGAACCCTCACAACACCGTCTTCGACGCCAAGCGCTTGATC 710 Query 195506 GGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTT 195565 || ||||||||| | || | | || || ||| || ||| ||||| | | | ||| | Sbjct 711 GGCCGCAAGTTTGCCGACGCGGAGGTGCAGTCCGACATGAAGCACTGGCCCT-TCAAGGT 769 Query 195566 GTTC--CCGGTGTGGCTGATAAGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAAC 195623 || || | ||||| ||||| || ||| | || || | | ||| |||| || Sbjct 770 CGTCGACCAGGGTGGC----AAGCCCATCATTCAGGTCGAGTACCGCGGCGAGACCAAGA 825 Query 195624 AATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAAT 195683 || |||| || || ||||| || ||||| | | |||||| |||||||| || Sbjct 826 CCTTCACTCCTGAGGAGATTTCTTCCATGGTCCTCACCAAGATGCGCGAGACTGCCGAGG 885 Query 195684 CTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATT 195743 ||| | | ||| ||| || || || || || || || || || || ||||||| |||| Sbjct 886 CTTACCTCGGTGGAACGGTCAAGGACGCCGTCGTCACAGTGCCGGCCTACTTCAACGATT 945 Query 195744 CACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTC-TTAGAATT 195802 | ||||| ||||| || |||||||| | | ||||| ||||| ||| ||| | | || Sbjct 946 CCCAACGCCAGGCTACCAAGGACGCCGGCACAATTGCCGGTCTCAAC-GTCATGCGTATC 1004 Query 195803 ATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGAT 195862 ||||| || || || || ||||| ||||| || ||||| |||||||| |||| || Sbjct 1005 ATCAACGAGCCCACCGCCGCTGCTATTGCGTACGGTCTCGACAAGAAGGGCGACGGCGAG 1064 Query 195863 AAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATT 195922 || || || | ||||| || || ||||| ||||| || |||||||| || |||| ||| Sbjct 1065 AAGAACGTGCTCATCTTCGACCTTGGTGGCGGTACCTTCGATGTCTCCCTGCTCACCATT 1124 Query 195923 GAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGAT 195982 || | ||||| ||||| || |||||||| |||||||| || || | |||||||| || Sbjct 1125 GAGGAGGGTATTTTCGAGGTCAAGGCTACCGCTGGTGACACCCACTTGGGTGGTGAGGAC 1184 Query 195983 TTCGATGCACGTCTTCTC-CGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGA 196041 ||||| ||||| || || || ||| | |||||| || ||||| ||||| || Sbjct 1185 TTCGACAACCGTCTCGTCACGCACTTCGTC-CAGGAGTTCAAGCGCAAGAACAAGAAGGA 1243 Query 196042 TATTTCTGGAAATC--CTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAA 196099 ||| | || || || | || | ||||| || | ||||| ||| ||||| || Sbjct 1244 CATTAC--GACCTCGGCTCGTGCCGTCCGTCGTCTCCGCACTGCGGCTGAGCGTGCGAAG 1301 Query 196100 CGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATT 196159 || ||||| || || | ||||| || | | ||||| || ||| | || || || || Sbjct 1302 CGCACTCTGTCCTCGGCTGCTCAGACTACCATCGAGATCGACTCGCTCTTCGAGGGCATC 1361 Query 196160 GACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGG 196219 |||||||| || | || |||||||| || || || ||| | | ||| | || | Sbjct 1362 GACTTCTACACTAGCATCACCCGTGCTCGCTTCGAGGAGCTCTGCGGTGACCTCTTCTCG 1421 Query 196220 AAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTT 196279 | || || || || || | || || || ||| | ||||| || ||| || Sbjct 1422 CACACCATCGAGCCCGTCGAGAAGGTGCTCCGCGACTCCAAGATAGACAAGGGCGCCGTC 1481 Query 196280 GATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCT 196339 | || || || || || || || || || |||||||| |||| || | ||| | Sbjct 1482 CACGAGATCGTTCTCGTCGGTGGTTCGACGCGTATTCCTCGTGTTCAGAAGCTCCTTCGT 1541 Query 196340 AGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTAT 196399 ||||||||| || ||||| ||||||||||||| || || || || || Sbjct 1542 GACTTCTTCAACGGCCGGGAGCCCAACAAGTCGATCAACCCGGACGAGGCCGTCGCCTAC 1601 Query 196400 GGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTT 196459 ||||| |||||||||||||| || ||| |||| | | || |||||| || Sbjct 1602 GGTGCTGCCGTTCAGGCTGCCATCCTCAGCGGTGACACCTCGGAGAAGACCCAAGACCTG 1661 Query 196460 CTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACT 196519 || || || || || || || | ||| ||||| | || ||||| |||||||| | || Sbjct 1662 CTCCTTCTCGACGTCGCCCCGTTGTCCATGGGTATCGAGACAGCCGGTGGTGTCTTCACG 1721 Query 196520 AAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTAT 196579 | || | | ||||| || | ||||| |||||| | |||| || || || Sbjct 1722 CCGCTCATCAAGCGCAACACGACGGTGCCGACCAAGAAGTCGGAGATCTTCTCGACCTAC 1781 Query 196580 TCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAG 196639 |||| || ||||| ||||| ||||| ||||| || || || || | || | ||| Sbjct 1782 GCCGACAACCAACCCGGTGTCTTGATTCAGGTATACGAGGGCGAGCGTGCACGGACCAAG 1841 Query 196640 GATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTT 196699 || ||| | || || || | ||||| | | || ||||| || || ||| | ||||| Sbjct 1842 GACAACAACCTCCTCGGCAAGTTCGAGCTCTCTGGCATTCCTGCCGCGCCCCGTGGTGTG 1901 Query 196700 CCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAG 196759 || ||||| | ||| |||||| | ||||| || ||||| ||||| | || | Sbjct 1902 CCTCAGATCGAGGTTACCTTCGACGTCGACGCCAACTCGATTCTCAACGTGTCGGCCGCC 1961 Query 196760 GACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCT 196819 |||||| || ||||||| ||| | ||||| ||||||||| |||||||| ||| | || Sbjct 1962 GACAAGACTACTGGCAAGTCTCAGAAGATCACGATTACCAACGACAAGGGCCGGTTGTCC 2021 Query 196820 AAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 ||||| || || || || ||||| | || || || ||||||| || || ||||||| Sbjct 2022 AAGGACGACATCGAGCGCATGGTCAACGAGGCCGAGAAGTACAAGGCCGAGGACGAGG 2079 >seq146 Length=265622 Score = 183 bits (202), Expect = 4e-41 Identities = 178/228 (78%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 171873 TGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGA 171932 ||| || ||||| ||||| || || || ||||||||||| ||||| ||||| ||||| Sbjct 40441 TGTCAAGACCCTGACTGGCAAGACCATTACCCTCGAGGTCGAGTCTGGTGACACGATCGA 40382 Query 171933 TAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTAT 171992 ||| |||| ||||||| || || ||||| |||||||| || || ||||||||||| || Sbjct 40381 CAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCGCCAGACCAGCAACGACTCAT 40322 Query 171993 TTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGA 172052 || ||||| || ||||| || || || || || ||||| || |||||| | || ||||| Sbjct 40321 CTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCGGACTACAACATCCAGAAGGA 40262 Query 172053 GTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGCAACCGACGA 172100 ||||||||| |||||||| || | || || |||||| ||| ||||| Sbjct 40261 GTCTACTCTCCACCTTGTCCTTCGCCTCCGCGGTGGT-CAATAGACGA 40215 >seq59 Length=598887 Score = 168 bits (186), Expect = 9e-37 Identities = 177/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171859 AGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCG 171918 || ||||| ||||| || || ||||| || || || || |||||||||||||| ||||| Sbjct 73223 AGCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTGGAGTCC 73164 Query 171919 TCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGAT 171978 ||||| ||||| || |||| ||||||| || || ||||| ||||| || || || Sbjct 73163 GGTGACACCATCGACAATGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCGCCTGAC 73104 Query 171979 CAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTAC 172038 |||||||| || || ||||| || || ||||| || || || || ||||| || || ||| Sbjct 73103 CAGCAACGCCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTTGCGGACTAC 73044 Query 172039 AACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091 ||| | || |||||||| || || || ||||| || | || || |||||||| Sbjct 73043 AACATCCAGAAGGAGTCGACCCTCCATCTTGTGCTTCGCCTGCGTGGTGGTGC 72991 >seq125 Length=635640 Score = 156 bits (172), Expect = 6e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| |||||||| || || || || || || || |||||||||||||| ||||| Sbjct 378386 ATGCAGATCTTTGTCAAGACGCTCACAGGCAAGACGATCACCCTCGAGGTCGAGTCCGGC 378445 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| |||| ||||||| || || ||||| ||||| || || || ||| Sbjct 378446 GACACCATTGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCAG 378505 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || ||||| || || ||||| ||||| || || ||| | || || |||||| Sbjct 378506 CAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAAGACGGCCGCACCTTGGCCGACTACAAC 378565 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGCA 172092 | || |||||||| || || || || || || |||| || || || ||| Sbjct 378566 ATCCAGAAGGAGTCCACCCTCCATCTCGTCCTCCGGCTCCGCGGCGGCGCA 378616 >seq41 Length=375347 Score = 149 bits (164), Expect = 8e-31 Identities = 153/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 171874 GTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGAT 171933 || || ||||| || || || || |||||||||||||| |||||| ||||| ||||| Sbjct 19441 GTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTGGAGTCGGGGGACACCATCGAC 19500 Query 171934 AACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATT 171993 || |||| |||||||||| || ||||| ||||| || || || ||||| || || || Sbjct 19501 AATGTCAAGACCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAGCAGCGGCTGATC 19560 Query 171994 TTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAG 172053 || || || || |||||||| || || || || || || || |||||| | || |||||| Sbjct 19561 TTCGCCGGCAAGCAGCTTGAGGACGGCCGCACACTGGCCGACTACAACATCCAGAAGGAG 19620 Query 172054 TCTACTCTACACCTTGTTCT 172073 || || || |||||||| || Sbjct 19621 TCGACCCTTCACCTTGTACT 19640 >seq150 Length=639408 Score = 95.1 bits (104), Expect = 2e-14 Identities = 219/326 (67%), Gaps = 3/326 (1%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||||||||||| || || | | | |||| | | || | | || || || || Sbjct 366486 AAGATGAAGGAGACCGCCGAGGCCTACCTGGGCCACCCCGTCACCCACGCCGTCGTCACC 366427 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || | || || ||||| || |||||||| | | ||||| Sbjct 366426 GTCCCCGCCTACTTCAACGACGCCCAGCGTCAGGCCACCAAGGACGCCGGCACGATTGCC 366367 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| | | | | | ||| |||| || || || || ||||| || || || ||||| Sbjct 366366 GGTCTCACCGTTATGCGCATTGTCAACGAGCCCACGGCCGCTGCCATCGCGTACGGTCTT 366307 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 |||||||| | ||| | | || || | ||| || | |||||||||||||| Sbjct 366306 GACAAGAAGGGCGGCGA-GTCGCAGATC-ATCG-TCTACGACTTGGGTGGTGGTACGTTC 366250 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 |||||||| || || || || | || | ||||| || || || || ||||| Sbjct 366249 GATGTCTCGCTCCTTTCCATCGAGGACGGCGTTTTCGAGGTGCTTGCCACCGCCGGTGAC 366190 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGA 195987 || || || ||||| || || ||||| Sbjct 366189 ACCCACCTGGGTGGCGAGGACTTCGA 366164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657859678094320