Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq130 152 5e-32 seq125 98.7 9e-16 seq59 89.7 5e-13 >seq130 Length=202609 Score = 152 bits (168), Expect = 5e-32 Identities = 967/1517 (64%), Gaps = 60/1517 (4%) Strand=Plus/Minus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||| || || ||||| | || || || ||| | |||| | ||| | |||||||| Sbjct 61602 ACCTGGAACTCGCCGGCGAGCACACGGCGGGTGTAGAGGTTGCTCGTGTACGGCTCAAAG 61543 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 | |||||| || || |||||| ||| | ||| |||||||| || | || ||| Sbjct 61542 CACTCGTTGAAGCCGAGGATCTGACTCGTAGACGCCGTCGGCATCGGTGCGAGCAGAAGC 61483 Query 138628 GAATTCCGTAAACCGTGAAGCTTG-ATTCGTTC-CTTGAGCGACGACCAGTCCCACAAAT 138685 || || || | |||||| | | | | || | | ||||||| | ||||||||||| Sbjct 61482 GAGTTTCGCAGACCGTG--GGTCGCAATCTTGCGCTTGAGCTCGGCCCAGTCCCACAGGG 61425 Query 138686 CGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTT 138745 ||| || | ||| | |||||||| | | ||| || || || ||||| | Sbjct 61424 AGCTGGGCGTGACACCCCAGAGGTCGTACTGGAGCTCGCCCTGGCTGGCTGGGCTGCCCT 61365 Query 138746 CGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGC-CTCGAGCGCACCA 138804 |||||| ||||| |||| ||| | || | |||| | || |||||| || | Sbjct 61364 CGTACGTCTCGTACGGGCCAAGCTCCTTTGCAATCTCGCA-CGAGCGCTCGAGGGCGGCG 61306 Query 138805 TAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGC 138864 | ||| || || ||| || || |||||| |||||||| ||| ||| | ||| Sbjct 61305 TGGTAGATGGTCTCGAAGATTTGAATGTTGAGCCTCTTGGCCTCGGGGCTGTCGAA-GGC 61247 Query 138865 AT-GCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATG 138923 | || | ||| |||| |||||||| || || | || || | |||| || || || Sbjct 61246 GTAGCCCATGATCATGAATGCGTCGGCAAGACCGTTGACACCAATGCCGATGGGACGGTG 61187 Query 138924 GCGCAGATTTGACGCTTTTGCGGCTTCG---ATAGGATAATAGTTTACATCGATGATTTT 138980 ||||| || ||| || ||| ||| | ||| || ||||| || |||||||| || Sbjct 61186 GCGCATGTTCGACTTCTT---GGCCTCGGGCACAGGGTAGTAGTTGACGTCGATGATCTT 61130 Query 138981 GTTTAAATTTCGCACG-ACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTG 139038 ||| || || |||| || ||||| || | | | | | | | ||| ||||| || Sbjct 61129 GTTCAAGTTG-GCACACACGACCTTGGTAACCT-CGTGCAGCTTCTTAAAGTCGTACGTC 61072 Query 139039 C---CCCCGTTGTCGTCGA--CGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGT 139093 | | ||| | ||| || || | | || | || | || ||| | || Sbjct 61071 CTTGCACCGGTCTCGG-GATCCGGCTT-GATGTAGGTGGGAAGCGCGATACTGGCCAGGT 61014 Query 139094 TGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTAC 139153 |||| || || || || || ||| | ||||| || | || || | || | || | Sbjct 61013 TGCAGACGGCGACCTCATCAGGGGCACTGTACTCAATGATCTCCGTGCAGAGGTTCGAGC 60954 Query 139154 ACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCA 139213 ||||||| || || | || | || || || ||||| ||| || ||||| |||| Sbjct 60953 ACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCAGCGTCCTTGTAGAGCA 60894 Query 139214 TATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTT 139273 | | || ||||||| ||| || | ||| | || | || || | | || Sbjct 60893 TGAATGGGTTGCCAGTCTCCGTCTGAGCCTCGAGGATAGCGT---ACCAGAGCTT--CTG 60839 Query 139274 GTATTTGAC-GCACGTAAAGTTCG----TCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA 139328 | ||||| | || | || |||||||||||||| | ||| || | ||||| Sbjct 60838 GGCCTTGACCGTGCGGCGGGCCCGGCCCTCGCGCTCGTACTTGTGGTACAGAGCCTCGAA 60779 Query 139329 TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATAC 139388 || || ||| |||| | ||| || | || | | | || ||||| || ||||| | Sbjct 60778 CTCCTCGCCATAGACGTCGGCAAGGCCGGGGCATTCGGCGGGGCACATAAGAGACCACTC 60719 Query 139389 GCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCG---AACAGCAA 139445 ||||||| || ||| ||| |||||||||| ||||| ||||| | |||| || ||| Sbjct 60718 GCCGTTCTGCTCGACTCGCTTCATGAACAGGTCCGGGATCCAGAGAGCGTAGAAGAGCTC 60659 Query 139446 ATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCAAAA 139503 | || |||| | | ||||| || ||| | | || | | || ||||| ||||| Sbjct 60658 A-CGGGCGCGGACCT--CTTCCTTGCC-ATGGTTC-TTGCGGAGGTCGAGGAACTCAAAG 60604 Query 139504 ACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCT 139560 ||||| | |||||| || || | |||||||| | || || ||| ||| |||||| Sbjct 60603 ACGTCCGAGTGCCAGGGCTCGATGTAGATGGCAAAGGCACCGGGCCGCTTGTTGCCACCT 60544 Query 139561 TGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCT 139620 || ||||| | | | | | || ||| | || || | ||| ||| | | ||| | | Sbjct 60543 TGGTCGACATACCTTGCGGTGTTGTTGTAGACTCGGAGCATGGGCACGATGCCGTTGGAG 60484 Query 139621 GTTCCGTTGGT----GCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGAT 139676 |||||||| || | | ||| || | ||| | || | | || | |||| Sbjct 60483 ACACCGTTGGTACCGGCAATGTATGA-ACCGGTGCCA---CGAATGCAGTGGATGTTGAG 60428 Query 139677 GCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATATAC 139735 ||||| || ||| | ||| || | |||| || | | || ||||| || | Sbjct 60427 ACCGATGCCACCGGCTGTCTTGCTGATCATGGCGCAGGTCTTG-AGGGTGTCGTAGATGC 60369 Query 139736 CTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGC-GGTAGTTTC 139794 | ||| |||||||| ||| ||||| || ||||||||||| | |||| ||| | | Sbjct 60368 CCTCGATGGAGTCGTCCTTCATGGTGACGAGGAAGCATGACGACATTTGCGGGTTGGGT- 60310 Query 139795 GTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCG 139854 |||||||| || || || || || || ||||| | | ||||||||| | | Sbjct 60309 GTGCCGGCATTGAAGAGCGTCGGCGAGGCATGGGTGAAGTACTTCTCCGACATCAAGTTG 60250 Query 139855 TACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGC 139914 || || || || || | | || || | ||||| |||||||||| || ||||| ||| Sbjct 60249 TATGTCTCAATCGCCTTGTCGATGTCATTGCCGTGAATACCGACAGCAACACGCATGAGC 60190 Query 139915 ATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGG 139974 || || || || ||||||||| ||| | ||| | ||| || | ||| ||| Sbjct 60189 ATGTGCTGAGGCCTCTCGGCCACCTTGCCGTTGATCCTGAGCAGGTACGAGCGCTCGAGG 60130 Query 139975 GTCTTGTAGCCAAAGTA 139991 |||||| | || ||||| Sbjct 60129 GTCTTGAATCCGAAGTA 60113 >seq125 Length=635640 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || ||||| || || || || || || ||||| || || || Sbjct 378385 GATGCAGATCTTTGTCAAGACGCTCACAGGCAAGACGATCACCCTCGAGGTCGAGTCCGG 378444 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 |||||| | || |||| || || |||||||| ||||| || || || || || || | Sbjct 378445 CGACACCATTGACAACGTCAAGAC-CAAGATCCAGGACAAGGAGGGCATCCCGCCAGACC 378503 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || ||| | ||||||||||| || ||||| || || | | | || | || || | Sbjct 378504 AGCAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAAGACGGCCGCACCTTGGCCGACTACA 378563 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 |||| || ||||| || || || || | || | || | ||||| |||| Sbjct 378564 ACATCCAGAAGGAGTCCACCCTCCATCTCGTCCTCCGGCTCCGCGGCGGCG 378614 >seq59 Length=598887 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || ||||| || || || Sbjct 73220 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTGGAGTCCGGT 73161 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 73160 GACACCATCGACAATGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 73101 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| ||||||||||||| || ||||| ||||| | | | | | || || ||| Sbjct 73100 CAACGCCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTTGCGGACTACAAC 73041 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || || | ||| | || |||| || || Sbjct 73040 ATCCAGAAGGAGTCGACCCTCCATCTTGTGCTTCGCCTGCGTGGTGG 72994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895738548680