Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq125 96.9 7e-15 seq59 91.5 3e-13 >seq125 Length=635640 Score = 96.9 bits (106), Expect = 7e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 |||||||| || || || || |||||||| || | || || ||||| || || || ||| Sbjct 378543 CCGTCTTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGCGGGATGCCCTCC 378484 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 || || || ||||| | || || || ||||| || || | || || || | || Sbjct 378483 TTGTCCTGGATCTTGGTCTTGACGTTGTCAATGGTGTCGCCGGACTCGACCTCGAGGGTG 378424 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||||||||| | |||||| ||||| |||||||| Sbjct 378423 ATCGTCTTGCCTGTGAGCGTCTTGACAAAGATCTGCAT 378386 >seq59 Length=598887 Score = 91.5 bits (100), Expect = 3e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || || || ||||| || || || || | || | | |||||| || || || Sbjct 73018 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGACCGTCCTCGAGCTGC 73077 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || |||||||| || | ||| || || || || || || ||||| || || ||||| Sbjct 73078 TTGCCGGCAAAGATCAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTG 73137 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 | || ||||| || || || ||| | || || || | || ||||||||||| || Sbjct 73138 GTCTTGACATTGTCGATGGTGTCACCGGACTCCACCTCGAGGGTGATCGTCTTGCCCGTG 73197 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| || || |||||||| Sbjct 73198 AGGGTCTTGACGAAGATCTGCAT 73220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981823036132209