Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq130 390 1e-103 seq206 179 4e-40 seq125 138 1e-27 seq59 125 7e-24 seq41 116 4e-21 seq146 109 5e-19 >seq130 Length=202609 Score = 390 bits (432), Expect = 1e-103 Identities = 1120/1702 (66%), Gaps = 49/1702 (3%) Strand=Plus/Minus Query 148071 AACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTAT-CTTCATCTCCCAGGCCGT 148129 |||||||||||||| |||||||| || |||| || | || | | |||||||| |||| Sbjct 61797 AACGCGCCACGGTCGGCGGCCATGTCGATGA-TCACCTTCTGCGAGATCTCCCACACCGT 61739 Query 148130 CTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCGCGGTG 148189 |||||| || |||||| | ||||| || ||| | | || | |||||| | ||| Sbjct 61738 CTTGTAGAGGGCCTTGATCCGGTCGGGGATCCCGGGCACGTTTTGAATCGAGCCACCGTG 61679 Query 148190 CGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTCATCGAT 148249 |||| || | || ||| | || | ||||| |||||| || ||| || Sbjct 61678 TGCAATGATGCGGTTCTTCATCTGTTCGTTCCATAGGCCTTGCTCGACGAGCTCACGGAG 61619 Query 148250 CAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCT 148309 ||| | | || |||||||| ||||||||||||||||| || || || | |||||| Sbjct 61618 CAGCCATGGGTTGACCACCTGGAACTCGCCGGCGAGCACACGGCGGGTGTAGAGGTTGCT 61559 Query 148310 CGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCAT 148369 ||| |||| ||||| |||||||| ||| | ||||| || | ||||| ||||| Sbjct 61558 CGTGTACGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTCGTAGACGCCGTCGGCAT 61499 Query 148370 GTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGC 148429 || | ||| |||||||| |||| |||| | | || |||||||| || | || Sbjct 61498 CGGTGCGAGCAGAAGCGAGTTTCGCAGACCGTGGGTCGCAATCTTGCGCTTGAGCTCGGC 61439 Query 148430 CCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCT 148489 ||||||||| || | || || || ||| | ||||||||| || ||| |||| Sbjct 61438 CCAGTCCCACAGGGAGCTGGGCGTGACACCCCAGAGGTCGTACTGGAGCTCGCCCTGGCT 61379 Query 148490 AGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCA-GCTCG 148548 || |||||||||||||||| |||||| || || || || | ||||| | || Sbjct 61378 GGCTGGGCTGCCCTCGTACGTCTCGTACGGGCCAAGCTCCTTTGCAATCTCGCACGAGCG 61319 Query 148549 CCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACT 148608 |||||| ||| ||| ||| || |||||| ||||| |||||||| | ||| Sbjct 61318 -CTCGAGGGCGGCGTGGTAGATGGTCTCGAAGATTTGAATGTTGAGCCTCTTGGCCTCGG 61260 Query 148609 CGCTTTCGTACGGCATA-CGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACG 148667 ||| ||| | ||| || | || || || ||||||||||| || | || || | | Sbjct 61259 GGCTGTCG-AAGGCGTAGCCCATGATCATGAATGCGTCGGCAAGACCGTTGACACCAATG 61201 Query 148668 CCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC---GGATAGTGGTTG 148724 || ||||| ||||| ||||| || | | |||| || || |||| |||| Sbjct 61200 CCGATGGGACGGTGGCGCATGTTCGA---CTTCTTGGCCTCGGGCACAGGGTAGTAGTTG 61144 Query 148725 CGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTC 148783 ||||||||||||| ||||| | || || ||| ||||| |||| | ||||| | Sbjct 61143 ACGTCGATGATCTTGTTCAAGTTGGCACA-CACGACCTTGGTAACCTCGTGCAGCTTCTT 61085 Query 148784 AAAATCGTACTTGTCAT--CTACGAT----GCATC--GGTTCACG------------GCG 148823 ||| |||||| ||| | | || | | ||| | || | | ||| Sbjct 61084 AAAGTCGTAC--GTCCTTGCACCGGTCTCGGGATCCGGCTTGATGTAGGTGGGAAGCGCG 61027 Query 148824 ATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCG 148883 ||| ||| || ||||| ||||| |||||| ||||| |||||||| | |||||| | | Sbjct 61026 ATACTGGCCAGGTTGCAGACGGCGACCTCATCAGGGGCACTGTACTCAATGATCTCCGTG 60967 Query 148884 CACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCG 148943 || || || ||| ||||| ||| | |||||| || || ||||| |||| ||| Sbjct 60966 CAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCAGCG 60907 Query 148944 TCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGATGC 149003 |||||||| |||||| | || |||||| ||| ||| | || | || | || | Sbjct 60906 TCCTTGTAGAGCATGAATGGGTTGCCAGTCTCCGTCTGAGCCTCGAGGAT--AGCGTACC 60849 Query 149004 --AGGTCCTGCG-CGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTA--TAAAGTAT 149058 || | ||| | | | | ||| || | || ||||| ||||||| | ||| Sbjct 60848 AGAGCTTCTGGGCCTTGACCGTGCGGC-GGGCCCGGCCCTCGCGCTCGTACTTGTGGTAC 60790 Query 149059 ACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACA 149118 | ||| ||||||| ||||||| ||| ||| | || |||||||| | | ||||||| Sbjct 60789 AGAGC--CTCGAACTCCTCGCCATAGACGTCGGCAAGGCCGGGGCATTCGGCGGGGCACA 60732 Query 149119 TGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCG 149178 | || |||||| |||||| | | || |||||||| ||||| || || | |||||| | Sbjct 60731 TAAGAGACCACTCGCCGTTCTGCTCGACTCGCTTCATGAACAGGTCCGGGATCCAGAGAG 60672 Query 149179 CGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCA 149238 |||| | ||| || || || | ||||| ||| ||| ||| |||| ||| | Sbjct 60671 CGTAGAAGAGCTCACGGGCGCGGACCTCTTCCTTGCCATGGTTCTTGCGGAGGTCGAGGA 60612 Query 149239 CGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---T 149295 || | ||||| |||||| ||||| ||||| | || | || || ||| | Sbjct 60611 ACTCAAAGACGTCCGAGTGCCAGGGCTCGATGTAGATGGCAAAGGCACCGGGCCGCTTGT 60552 Query 149296 TGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGC 149355 |||| || |||||||| | | | ||||||| | ||||| | ||| || | |||| Sbjct 60551 TGCCACCTTGGTCGACATACCTTGCGGTGTTGTTGTAGACTCGGAGCATGGGCACGATGC 60492 Query 149356 CACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGT 149415 | ||| ||||| ||| | |||| ||| | || | ||| | || Sbjct 60491 CGTTGGAGACACCGTTGGTACCGGCAATGTATGAACCGGTGCCACGAATGCAGTGGATGT 60432 Query 149416 TGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGA 149475 ||| |||||||| ||| | ||| ||| |||||| ||| || ||||| Sbjct 60431 TGAGACCGATGCCACCGGCTGTCTTGCTGATCATGGCGCAGGTCTTGAGGGTGTCGTAGA 60372 Query 149476 TGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAAC 149535 ||||||||||| |||| ||||||||| | || ||||| || |||||||||| Sbjct 60371 TGCCCTCGATGGAGTCGTCCTTCATGGTGACGAGGAAGCATGACGACATTTGCGGGTTGG 60312 Query 149536 GCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCT 149595 | |||||||| ||| | || || ||| || || || || |||| ||||| | Sbjct 60311 GTGTGCCGGCATTGAAGAGCGTCGGCGAGGCATGGGTGAAGTACTTCTCCGACATCAAGT 60252 Query 149596 CGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCA 149655 ||| | ||| | | | ||| ||||||| ||| || || || | || || ||||| | Sbjct 60251 TGTATGTCTCAATCGCCTTGTCGATGTCATTGCCGTGAATACCGACAGCAACACGCATGA 60192 Query 149656 GCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTA 149715 |||| ||||| || | ||| ||||| ||| || |||||| ||| | || | Sbjct 60191 GCATGTGCTGAGGCCTCTCGGCCACCTTGCCGTTGATCCTGAGCAGGTACGAGCGCTCGA 60132 Query 149716 GTGTCTTGTAGCCAAAGTACTT 149737 | |||||| | || ||||| || Sbjct 60131 GGGTCTTGAATCCGAAGTAATT 60110 >seq206 Length=170121 Score = 179 bits (198), Expect = 4e-40 Identities = 305/439 (69%), Gaps = 15/439 (3%) Strand=Plus/Plus Query 120376 aaaaaGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAACGGGTTGCTCGCG 120435 || ||||| || ||||||| || || ||||| | |||||| |||||||||||||||||| Sbjct 151190 AAGAAGTTCGTCTTGCCCTGCAAAGAGATGTTCTCCATAAAGTCGAACGGGTTGCTCGCG 151249 Query 120436 TTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGGTCCGCTACAAACTCAATGTAC 120495 || ||| || | ||| | | |||||||| ||||| || || ||||| |||||| Sbjct 151250 TTGTAGTGCTTGTCGTTGCCGAGCGAAACGAGCAGGCGGTCGGCAACGAACTCGATGTAC 151309 Query 120496 TCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAACGCCGACGTGAAAAAC 120555 | || |||| | ||| ||||||||| | | || || || | ||| |||| || Sbjct 151310 TGGCTCATGAGCCGCGAGTTCATGCCGATGAGCGAGACGGGGAGCGCGTCGGTGAGGAAG 151369 Query 120556 TCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGAGCATAGTGT---GGCCGGGCATC 120612 ||| ||| ||| ||| ||||| ||| ||| ||| | || || |||| | Sbjct 151370 GCCTGCTCGATGGTCACAGCCTCGGTGATGATGCGGAGGACGACGTCCGGGTGGGGCCGC 151429 Query 120613 TTGTGTTCGATGCGCGTTCGGTAGTACAGG---CACGCAAAGTCCGTGTGCAGGCCCTCG 120669 || ||| | || || | ||||| || |||||||| ||||||| ||||||| Sbjct 151430 TT----TCGGAG---GT--GGCTGAACAGGAGGCAGGCAAAGTCGGTGTGCAAGCCCTCG 151480 Query 120670 TCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGATG 120729 || || |||||||||||| || || ||||||||||| | || | |||||| Sbjct 151481 TCTCGGCTGATCAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGACCGCGCTTCTTGAGC 151540 Query 120730 TAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATGGCAAAGGCGACC 120789 |||| |||| || ||| ||| || ||||| | |||||| ||| |||||||| || Sbjct 151541 CAGAAAATGGACGCGAAGGAGCCGGAGAAGAAGATGCCCTCGACGGCAGCAAAGGCAACG 151600 Query 120790 ATGCGCTCGGCCAACGTCG 120808 | |||||| || ||||||| Sbjct 151601 AGGCGCTCCGCGAACGTCG 151619 >seq125 Length=635640 Score = 138 bits (152), Expect = 1e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||||||||| ||||| || ||||| ||| ||| ||| ||| |||||||| Sbjct 378589 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCTTCGAGCTG 378530 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || | ||||| ||||||||||| || |||||||| |||||||| |||||| Sbjct 378529 CTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTT 378470 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | |||| |||||| || ||| || |||| ||||| || ||||| || Sbjct 378469 GGTCTTGACGTTGTCAATGGTGTCGCCGGACTCGACCTCGAGGGTGATCGTCTTGCCTGT 378410 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || |||||||| Sbjct 378409 GAGCGTCTTGACAAAGATCTGCAT 378386 >seq59 Length=598887 Score = 125 bits (138), Expect = 7e-24 Identities = 153/206 (74%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| ||||| || ||||| || | | ||| ||| ||||||||||| Sbjct 73017 ATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGACC-GTCCTCGAGCT 73075 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || || || |||||||| || |||||||| |||||||| ||||| Sbjct 73076 GCTTGCCGGCAAAGATCAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCT 73135 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | || | ||||| || |||||| |||| ||||| || ||||| | Sbjct 73136 TGGTCTTGACATTGTCGATGGTGTCACCGGACTCCACCTCGAGGGTGATCGTCTTGCCCG 73195 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 | || || || ||||| ||||||||| Sbjct 73196 TGAGGGTCTTGACGAAGATCTGCATG 73221 >seq41 Length=375347 Score = 116 bits (128), Expect = 4e-21 Identities = 138/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| || ||||| ||| ||| ||| |||||| ||||||||||| Sbjct 19626 GGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGTGTGCGGCCGTCCTCAAGCTGCTTGCC 19567 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || |||||||||||||| || |||||||| |||||||| ||||| ||| Sbjct 19566 GGCGAAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTGGTCTT 19507 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | |||||| |||| ||||| || |||||||| || || Sbjct 19506 GACATTGTCGATGGTGTCCCCCGACTCCACCTCGAGGGTGATCGTCTTGCCGGTGAGGGT 19447 Query 133643 TTTTACG 133649 || ||| Sbjct 19446 CTTGACG 19440 >seq146 Length=265622 Score = 109 bits (120), Expect = 5e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| || | | |||| |||||||||||||||||| Sbjct 40256 GTAGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCA 40315 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| || |||||||| || || ||||| |||||||| |||||| |||| Sbjct 40316 GCGAAGATGAGTCGTTGCTGGTCTGGCGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTG 40375 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | |||||| | ||| || |||| ||| | ||| ||||| ||||| || Sbjct 40376 ACGTTGTCGATCGTGTCACCAGACTCGACCTCGAGGGTAATGGTCTTGCCAGTCAGGGTC 40435 Query 133644 TTTAC 133648 || || Sbjct 40436 TTGAC 40440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418799846440