Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq125 91.5 3e-13 seq41 91.5 3e-13 seq146 86.0 1e-11 >seq125 Length=635640 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTC--TG 206230 ||||| ||| ||| ||||||||||| || |||||||| | || || | ||| | | Sbjct 378389 CAGATCTTTGTCAAGACGCTCACAGGCAAGACGATCACCCTCGAGGTCG--AGTCCGGCG 378446 Query 206231 ACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290 |||| | || || ||| ||||| || || || || || || ||| ||| | Sbjct 378447 ACACCATTGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCAGC 378506 Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350 | | || ||||| ||||| |||||| | ||||| || | || |||||||| |||||| Sbjct 378507 AGCGTCTCATCTTTGCCGGCAAGCAGCTCGAAGACGGCCGCACCTTGGCCGACTACAACA 378566 Query 206351 TCCAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||||| ||||| || || || || || Sbjct 378567 TCCAGAAGGAGTCCACCCTCCATCTCGT 378594 >seq41 Length=375347 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || |||||||| | || ||||| ||||| |||| Sbjct 19443 CAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTGGAGTCGGGGGACACCATCGACAA 19502 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||| || || || || || || ||| || | || ||||| Sbjct 19503 TGTCAAGACCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAGCAGCGGCTGATCTT 19562 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | || || || | || ||||||| |||||| ||||||| ||||| Sbjct 19563 CGCCGGCAAGCAGCTTGAGGACGGCCGCACACTGGCCGACTACAACATCCAGAAGGAGTC 19622 Query 206364 TACTCTTCACCTTGT 206378 || ||||||||||| Sbjct 19623 GACCCTTCACCTTGT 19637 >seq146 Length=265622 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || || || ||| ||| ||| ||| |||| |||||||| || ||| Sbjct 40368 AAGATCCAGGACAAGGAGGGCATTCCGCCAGACCAGCAACGACTCATCTTCGCTGGCAAG 40309 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || || || | || | || || |||||| ||||||| ||||||||||| ||| Sbjct 40308 CAGCTCGAGGACGGCCGCACGCTCGCGGACTACAACATCCAGAAGGAGTCTACTCTCCAC 40249 Query 206374 CTTGT 206378 ||||| Sbjct 40248 CTTGT 40244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181815787971851