Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq130 114 1e-20 >seq130 Length=202609 Score = 114 bits (126), Expect = 1e-20 Identities = 958/1525 (63%), Gaps = 67/1525 (4%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 |||||||| || |||||||| || |||||||| | | || | ||||| ||| | ||| Sbjct 61608 TTGACCACCTGGAACTCGCCGGCGAGCACACGGCGGGTGTAGAGGTTGCTCGTGTACGGC 61549 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 ||||| |||| || ||| | || || ||| | || || ||||| || | | Sbjct 61548 TCAAAGCACTCGTTGAAGCCGAGGATCTGACTCGTAGACGCCGTCGGCATCGGTGCGAGC 61489 Query 147013 AACAATGAATTTCGCAGACCGTA---CGCACGGATGTTGTCCTTCAAAGTTTG--CCAGT 147067 | | || ||||||||||||| |||| || ||| ||| | | | | ||||| Sbjct 61488 AGAAGCGAGTTTCGCAGACCGTGGGTCGCA---ATCTTGCGCTTGA--GCTCGGCCCAGT 61434 Query 147068 CCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGG 147127 |||||| || |||||| || ||| | ||||||||||||| | || | ||||| | Sbjct 61433 CCCACAGGGAGCTGGGCGTGACACCCCAGAGGTCGTACTGGAGCTCGCCCTGGCTGGCTG 61374 Query 147128 GACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGC-CTCG 147186 | ||||| || |||| ||| || || || | || || | || |||| Sbjct 61373 GGCTGCCCTCGTACGTCTCGTACGGGCCAAGCTCCTTTGCAATCTCGCA-CGAGCGCTCG 61315 Query 147187 AGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTC 147246 || || | | ||| ||||| ||| |||||| |||| || | || || ||| Sbjct 61314 AGGGCGGCGTGGTAGATGGTCTCGAAGATTTGAATGTTGAGCCTCTTGGCCTCGGGGCTG 61255 Query 147247 TCGTAAGGCATA-CGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGAT 147305 ||| ||||| || | || | || || || ||||| | ||| | || ||| | |||||| Sbjct 61254 TCG-AAGGCGTAGCCCATGATCATGAATGCGTCGGCAAGACCGTTGACACCAATGCCGAT 61196 Query 147306 AGGTCGATGC----TTTTCGT-TGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGA 147360 || || || | |||| | || || ||| || | || |||| |||| Sbjct 61195 GGGACGGTGGCGCATGTTCGACTTCTTGGCCTCGGGCACA-----GGGTAGTAGTTGACG 61141 Query 147361 TCAATAATCTTGTTGAGGTTACGCACT-ACAACTTTAGTTATTGTTTTGAGTTTCTCGAA 147419 || || |||||||| | ||| |||| || || || || | | || |||| || Sbjct 61140 TCGATGATCTTGTTCAAGTTG-GCACACACGACCTTGGTAACCTCGTGCAGCTTCTTAAA 61082 Query 147420 ATCATAAGTCCCGTCTTCGA-CACG---TACGCATTGGTTCACG--------GCGATAGA 147467 || || |||| | || | || | || ||| | | | |||||| Sbjct 61081 GTCGTACGTCCTTGCACCGGTCTCGGGATCCGGCTTGATGTAGGTGGGAAGCGCGATACT 61022 Query 147468 CGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAG 147527 ||||| ||||||||||| ||| || | | | ||||||| | ||| || | ||| || Sbjct 61021 GGCCAGGTTGCAGACGGCGACCTCATCAGGGGCACTGTACTCAATGATCTCCGTGCAGAG 60962 Query 147528 GTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTT 147587 ||| ||| || ||| || | || | ||| || || || ||| ||||| || Sbjct 60961 GTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCAGCGTCCTT 60902 Query 147588 GAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGC-AGGT 147646 | |||||||| | || ||| ||||| || | || | |||| | || || | Sbjct 60901 GTAGAGCATGAATGGGTTGCCAGTCTCCGTCTGAGCCTCGAGGATAG-CGTACCAGAGCT 60843 Query 147647 CCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCT 147706 ||| || ||| | || ||||||||| |||||| | ||||| || Sbjct 60842 TCTGGGCCTTGACCGTGCGGCGGGCCCGGCCCTCGCGCTCGTACTTGTGGTACAGAGCCT 60783 Query 147707 CAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACC 147766 | ||||| ||||| ||| |||||||||||||| || | || ||||| || |||| Sbjct 60782 CGAACTCCTCGCCATAGACGTCGGCAAGGCCGGGGCATTCGGCGGGGCACATAAGAGACC 60723 Query 147767 ACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAA 147826 || | ||| | | || || ||| ||||| ||||| | ||| || ||||| | | Sbjct 60722 ACTCGCCGTTCTGCTCGACTCGCTTCATGAACAGGTCCGGGATCCAGAGAGCGTAGAAGA 60663 Query 147827 GATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATT--AAGCACGCTATA 147884 | || || || | || || ||| ||| | | | | | | | || | | | Sbjct 60662 GCTCACGGGCGCGGACCTCTTCCTTGCC-ATGGTTCTTGCGGAGGTCGAGGAACTCAA-A 60605 Query 147885 GATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCC 147941 || ||| | ||||||||| || ||||||| ||| | ||||| ||||| || || Sbjct 60604 GACGTCCGAGTGCCAGGGCTCGATGTAGATGGCAAAGGCACCGGGCCGCTTGTTGCCACC 60545 Query 147942 CTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGC 148001 |||||||||| | | ||||||| | || || | |||||| | | |||| | | Sbjct 60544 TTGGTCGACATACCTTGCGGTGTTGTTGTAGACTCGGAGCATGGGCACGATGCCGTTGGA 60485 Query 148002 AGTGCCGTTGGT----GGAAT---TGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGT 148054 |||||||| | ||| ||| | | |||| || ||| ||| | || Sbjct 60484 GACACCGTTGGTACCGGCAATGTATGAACCGG-TGCCACGAAT--GCA----GTGGATGT 60432 Query 148055 TAACGCCAATGCCGCCGCCGTACTT--TGAT-ATGGCAGCGCAATCGCCCAATGTCGTGT 148111 | | || ||||| ||| | ||| |||| ||||| | | | |||||| Sbjct 60431 TGAGACCGATGCCACCGGCTGTCTTGCTGATCATGGCGCAGGTCTTGAGGG-TGTCGT-- 60375 Query 148112 AGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAA 148171 ||||||| |||||| ||||| || | | | | || || || |||||||||| Sbjct 60374 AGATGCCCTCGATGGAGTCGTCCTTCATGGTGACGAGGAAGCATGACGACATTTGCGGGT 60315 Query 148172 TCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCA 148231 | | || || || ||| || || || || || || || | || | ||||| Sbjct 60314 TGGGTGTGCCGGCATTGAAGAGCGTCGGCGAGGCATGGGTGAAGTACTTCTCCGACATCA 60255 Query 148232 TGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCA 148291 | || |||||||| || | |||||||| | ||||||||| || | || || |||| Sbjct 60254 AGTTGTATGTCTCAATCGCCTTGTCGATGTCATTGCCGTGAATACCGACAGCAACACGCA 60195 Query 148292 TGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTT 148351 ||||||||||||| || | ||||| || | ||||||| |||| || || | Sbjct 60194 TGAGCATGTGCTGAGGCCTCTCGGCCACCTTGCCGTTGATCCTGAGCAGGTACGAGCGCT 60135 Query 148352 CGAGGGTTTTGTAACCAAAGTACTT 148376 ||||||| ||| | || ||||| || Sbjct 60134 CGAGGGTCTTGAATCCGAAGTAATT 60110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609228021160