Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq125 109 5e-19 >seq125 Length=635640 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||| | ||| | || | ||| | || || || || || || ||||||||| Sbjct 378613 GCCGCCGCGGAGCCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 378554 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 || | |||| ||||||||||||| || ||||| | ||||||||||| || || ||||| Sbjct 378553 CAAGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGCGG 378494 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || ||||||| | || | | | || | ||||| || || || Sbjct 378493 GATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCAATGGTGTCGCCGGACTCGAC 378434 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| || || || || |||||||| ||||| Sbjct 378433 CTCGAGGGTGATCGTCTTGCCTGTGAGCGTCTTGACAAAGATCTGCAT 378386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932685788072