Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq130 152 6e-32 seq206 93.3 5e-14 >seq130 Length=202609 Score = 152 bits (168), Expect = 6e-32 Identities = 561/865 (65%), Gaps = 19/865 (2%) Strand=Plus/Minus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 ||||| ||||| |||| ||||| || || |||||| | ||||||| | Sbjct 61035 GGAAGCGCGATACTGGCCAGGTTGCAGACGGCGACCTCATCAGGGGCACTGTACTCAATG 60976 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | ||| || | ||| || || || | ||||| ||||| ||| | Sbjct 60975 ATCTCCGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGG 60916 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||| || ||||||||||||||| | || | || ||||||||||| | | ||| ||| Sbjct 60915 TTGGCAGCGTCCTTGTAGAGCATGAATGGGTTGCCAGTCTCCGTCTGAGCCTCGAGGATA 60856 Query 111410 GCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468 || | ||| | | || | | || | || || | |||||| ||||| ||||||||| Sbjct 60855 GCGTACCAGAGCTTCTGGGCCTTG-ACCGTGCGGCGGGCCCGGCCCTCGCGCTCGTACTT 60797 Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTG 111527 ||| || || || |||||||| || |||||| || || || || || | | | Sbjct 60796 GTGGTACAGAGCCTCGAACTCCTCGCCATAGACGTCGGCAAGGCCGGG-GCATTCGGCGG 60738 Query 111528 GACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCC 111587 | || | ||||||||| | || | ||| || ||||||||||| ||||| || |||| Sbjct 60737 GGCACATAAGAGACCACTCGCCGTTCTGCTCGACTCGCTTCATGAACAGGTCCGGGATCC 60678 Query 111588 ACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACT 111647 | || | | ||||| || | || ||||||| | || ||||| || | | Sbjct 60677 AGAGAGCGTAGAAGAGCTCACGGGCGCGGACCTCTTCCTTGCCATGGTTCTTGCGGAGGT 60618 Query 111648 CAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC----CC 111703 | |||||||| | || |||| |||||| ||||| | |||| || | | | || Sbjct 60617 CGAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCGATGTAGATGGCAAAGGCACCGGGCC 60558 Query 111704 TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 111763 | | | ||| |||| | ||||| | || ||| ||| | || || ||||| || Sbjct 60557 GCTTGTTG-CCACCTTGGTCGACATACCTTGCGGTGTTGTTGTAGACTCGGAGCATGGGC 60499 Query 111764 ATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC--AT 111821 | || || | || ||| || || || ||| | | | | | ||| || Sbjct 60498 ACGATGCCGTTGGAGACACCGTTGGTACCGGCAAT----GTATGAACCGGTGCCACGAAT 60443 Query 111822 -CA-TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879 || ||||||| | || || || || || ||| ||| || || | | || Sbjct 60442 GCAGTGGATGTTGAGACCGATGCCACCGGCTGTCTTGCTGATCATGGCGCAGGTCTTGAG 60383 Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939 || | ||||| || | ||| ||||| ||||| ||| || |||||||| ||||| Sbjct 60382 GGTGTCGTAGATGCCCTCGATGGAGTCGTCCTTCATGGTGACGAGGAAGCATGACGACAT 60323 Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-T 111998 ||||| | ||||| || ||||||||||| || || | || || |||| ||| | | Sbjct 60322 TTGCGGGTTGGGTGTGCCGGCATTGAAGAGCGTCGGCGAGGCATGGGTGAA-GTACTTCT 60264 Query 111999 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTG 112058 |||||| || ||||||||| | | || ||||| | ||||| || |||| | Sbjct 60263 CCGACATCAAGTTGTATGTCTCAATCGCCTTGTCGATGTCATTGCCGTGAATACCGACAG 60204 Query 112059 CGACCCGCATGAACATGTACTGTGG 112083 | || ||||||| ||||| ||| || Sbjct 60203 CAACACGCATGAGCATGTGCTGAGG 60179 >seq206 Length=170121 Score = 93.3 bits (102), Expect = 5e-14 Identities = 118/160 (74%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| | ||||| |||||| || || || || |||||| || || Sbjct 151456 GGCAAAGTCGGTGTGCAAGCCCTCGTCTCGGCTGATCAGCTCGTTGGAGAAGGTGAGGCC 151515 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGA 122776 ||||| ||||| |||||||| | ||| |||| | ||| ||| || ||||||||||||| Sbjct 151516 GGGCATCAGACCGCGCTTCTTGAGCCAGAAAATGGACGC-GAAGGAGCCGGAGAAGAAGA 151574 Query 122777 TACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA 122816 | ||||| || ||||| |||| ||||| || ||||| Sbjct 151575 TGCCCTCGACGGCAGCAAAGGCAACGAGGCGCTCCGCGAA 151614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029401517600