Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq130 206 3e-48 seq206 102 1e-16 >seq130 Length=202609 Score = 206 bits (228), Expect = 3e-48 Identities = 565/854 (66%), Gaps = 11/854 (1%) Strand=Plus/Minus Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 ||||| ||||| ||||| || || || | | |||||| || ||||||| || Sbjct 61035 GGAAGCGCGATACTGGCCAGGTTGCAGACGGCGACCTCATCAGGGGCACTGTACTCAATG 60976 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || |||||||| | ||| || | ||| |||||||| | |||||| || || ||||| | Sbjct 60975 ATCTCCGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGG 60916 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || || |||||||| |||||| |||| | || |||||||| || | || ||| ||| Sbjct 60915 TTGGCAGCGTCCTTGTAGAGCATGAATGGGTTGCCAGTCTCCGTCTGAGCCTCGAGGATA 60856 Query 118884 GCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTT 118942 || | ||||| | || | || | || ||| | ||| || ||||| ||||||||| Sbjct 60855 GCGTACCAGAGCTTCTGGGCCTTG-ACCGTGCGGCGGGCCCGGCCCTCGCGCTCGTACTT 60797 Query 118943 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTAT-CTG 119001 ||| || || || ||||| || || | | || | || || || || || | | Sbjct 60796 GTGGTACAGAGCCTCGAACTCCTCGCCATAGACGTCGGCAAGGCCGGG-GCATTCGGCGG 60738 Query 119002 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCC 119061 |||| | |||||||| | || || ||| || ||||||||||| ||||| ||||||| Sbjct 60737 GGCACATAAGAGACCACTCGCCGTTCTGCTCGACTCGCTTCATGAACAGGTCCGGGATCC 60678 Query 119062 AGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 119121 |||| || ||||||| || || ||| | ||||| | || || || || | | Sbjct 60677 AGAGAGCGTAGAAGAGCTCACGGGCGCGGACCTCTTCCTTGCCATGGTTCTTGCGGAGGT 60618 Query 119122 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CC 119177 | | || || | || |||| |||||| || || | ||| | || | | ||| || Sbjct 60617 CGAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCGATGTAGATGGCAAAGGCACCGGGCC 60558 Query 119178 TTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGA 119237 | | ||| | |||| |||||||| || ||| ||| | || || ||||| || Sbjct 60557 GCTTGTTG-CCACCTTGGTCGACATACCTTGCGGTGTTGTTGTAGACTCGGAGCATGGGC 60499 Query 119238 ATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCG 119297 | ||| || | ||| || || || || ||| || || | | | | Sbjct 60498 ACGATGCCGTTGGAGACACCGTTGGTACCGGCAATGTATGAACCGGTGCCACGAATGCAG 60439 Query 119298 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTG 119357 ||||||| | ||| || || || || ||| ||| ||||| | |||| || Sbjct 60438 TGGATGTTGAGACCGATGCCACCGGCTGTCTTGCTGATCATGGCGCAGGTCTTGAGGGTG 60379 Query 119358 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGA 119417 ||||||| || ||||| ||||| |||| | | || ||||||||| ||||||||| Sbjct 60378 TCGTAGATGCCCTCGATGGAGTCGTCCTTCATGGTGACGAGGAAGCATGACGACATTTGC 60319 Query 119418 GGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGA 119476 || ||||||| || || |||||||| || || | || ||| |||| ||| | | || Sbjct 60318 GGGTTGGGTGTGCCGGCATTGAAGAGCGTCGGCGAGGCATGGGTGAA-GTACTTCTCCGA 60260 Query 119477 CATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGAC 119536 |||| || ||| ||||| | | | ||||| | ||||||||||||| | || Sbjct 60259 CATCAAGTTGTATGTCTCAATCGCCTTGTCGATGTCATTGCCGTGAATACCGACAGCAAC 60200 Query 119537 CCGCATAAACATGT 119550 ||||| | ||||| Sbjct 60199 ACGCATGAGCATGT 60186 >seq206 Length=170121 Score = 102 bits (112), Expect = 1e-16 Identities = 282/428 (66%), Gaps = 6/428 (1%) Strand=Plus/Plus Query 129749 AAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAATGGGTTCTTTGAG 129808 |||||||| ||||| || | ||| ||| ||||||||||| || || ||||| | | | Sbjct 151190 AAGAAGTTCGTCTTGCCCTGCAAAGAGATGTTCTCCATAAAGTCGAACGGGTTGCTCGCG 151249 Query 129809 TTCCAAATTGCTGGCACT--CCAATCTGTTTGAGGAGACGATCCGAGACGTACTCAATGT 129866 || | |||| | | || | | ||| || || || | ||| |||| |||| Sbjct 151250 TTGTAG--TGCTTGTCGTTGCCGAGCGAAACGAGCAGGCGGTCGGCAACGAACTCGATGT 151307 Query 129867 ACTCAGACATCTTCTCGGAGTTCATACCGATGAG-GTTACATGGGAGCGCGTCCAAGATG 129925 ||| ||| | |||||||| |||||||| | || ||||||||||| || | Sbjct 151308 ACTGGCTCATGAGCCGCGAGTTCATGCCGATGAGCGAGACG-GGGAGCGCGTCGGTGAGG 151366 Query 129926 AACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTCTCCGTGCCAGGT 129985 || ||| ||| ||| |||||| || | |||| | | | | |||| | || Sbjct 151367 AAGGCCTGCTCGATGGTCACAGCCTCGGTGATGATGCGGAGGACGACGTCCGGGTGGGGC 151426 Query 129986 CTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCTGGTGGAGACCCTCGTCACGG 130045 | || || | |||| || |||||| || ||| | |||||||| ||| Sbjct 151427 CGCTTTCGGAGGTGGCTGAACAGGAGGCAGGCAAAGTCGGTGTGCAAGCCCTCGTCTCGG 151486 Query 130046 GAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAA 130105 ||| || || || |||||| || || ||||| ||||| |||||||| | ||||||| Sbjct 151487 CTGATCAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGACCGCGCTTCTTGAGCCAGAAA 151546 Query 130106 ATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGAGACGC 130165 || | || ||||| ||||||||||| ||||| || || || |||| ||| ||| Sbjct 151547 ATGGACGCGAAGGAGCCGGAGAAGAAGATGCCCTCGACGGCAGCAAAGGCAACGAGGCGC 151606 Query 130166 TCAGCAAA 130173 || || || Sbjct 151607 TCCGCGAA 151614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432641224360