Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07]
331 sequences; 18,422,451 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq130 174 2e-38
seq206 113 5e-20
>seq130
Length=202609
Score = 174 bits (192), Expect = 2e-38
Identities = 569/868 (66%), Gaps = 21/868 (2%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| ||||||| || || |||||||||| || | ||||| || |
Sbjct 60179 CCTCAGCACATGCTCATGCGTGTTGCTGTCGGTATTCACGGCAATGACATCGACAAGGCG 60238
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||||||| || |||||| | | ||| |||| || || | || || |||||
Sbjct 60239 ATTGAGACATACAACTTGATGTCGGAGAAGTAC-TTCACCCATGCCTCGCCGACGCTCTT 60297
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
|||||| || ||||| | || |||||||| |||||||| || ||| ||||| ||
Sbjct 60298 CAATGCCGGCACACCCAACCCGCAAATGTCGTCATGCTTCCTCGTCACCATGAAGGACGA 60357
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
||| ||| | || ||||| | || || | | || || ||| ||| || ||
Sbjct 60358 CTCCATCGAGGGCATCTACGACACCCTCAAGACCTGCGCCATGATCAGCAAGACAGCCGG 60417
Query 104461 GGGTATTGGGATGCACATCCA-TG-AT--GTGAGAGCCAATAAATCTCGTATTCGGGGGA 104516
|| || || | ||||||| || || ||| | | | | | ||| || |
Sbjct 60418 TGGCATCGGTCTCAACATCCACTGCATTCGTGGCACCGGTTCATAC----ATTGCCGGTA 60473
Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576
| || ||| || | || || | || ||||| || || | ||| ||| || | |
Sbjct 60474 CCAACGGTGTCTCCAACGGCATCGTGCCCATGCTCCGAGTCTACAACAACACCGCAAGGT 60533
Query 104577 ATGTAAATCAAGCTGGGCGTCGAAAGG----GATCTATCGCAGTCTATCTTGAGCCATGG 104632
|||| | |||| ||| | | | || | | | || |||| | ||||| |||
Sbjct 60534 ATGTCGACCAAGGTGG-CAACAAGCGGCCCGGTGCCTTTGCCATCTACATCGAGCCCTGG 60592
Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692
||| |||| || | |||||||| || | || ||||| || | || |||| ||
Sbjct 60593 CACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCATGGCAAGGAAGAGGTCCGC 60652
Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752
||| || ||||||| |||||||||||| || || || ||||||||| |||| ||| ||
Sbjct 60653 GCCCGTGAGCTCTTCTACGCTCTCTGGATCCCGGACCTGTTCATGAAGCGAGTCGAGCAG 60712
Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGG 104811
| ||| | |||||||| | || || | | || || || || || |||| | | ||
Sbjct 60713 AACGGCGAGTGGTCTCTTATGTGCCCCGCCGAATGC-CCCGGCCTTGCCGACGTCTATGG 60771
Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGG-CGACTGCGACGG 104870
|||||||| || || || ||| ||||||||| || || |||| | | || ||||
Sbjct 60772 CGAGGAGTTCGAGGCTCTGTACCACAAGTACGAGCGCGAGGGCCGGGCCCGCCGC-ACGG 60830
Query 104871 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929
| | || | || | | ||| | ||||| ||| || |||| || |||||||| | |||
Sbjct 60831 T-CAAGGCCCAGAAGCTCTGGTACGCTATCCTCGAGGCTCAGACGGAGACTGGCAACCCA 60889
Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989
| |||||| ||||| ||||| |||| ||| || || ||||| | || |||
Sbjct 60890 TTCATGCTCTACAAGGACGCTGCCAACCGCAAGTCGAACCAGAAGAACCTCGGCACCATC 60949
Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049
||| | || || ||||| || || ||| | || | | | | |||||| || ||
Sbjct 60950 AAGTGCTCGAACCTCTGCACGGAGATCATTGAGTACAGTGCCCCTGATGAGGTCGCCGTC 61009
Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCA 105077
|| ||||| || ||||| || ||||
Sbjct 61010 TGCAACCTGGCCAGTATCGCGCTTCCCA 61037
>seq206
Length=170121
Score = 113 bits (124), Expect = 5e-20
Identities = 122/159 (77%), Gaps = 2/159 (1%)
Strand=Plus/Minus
Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857
|| || ||||| ||| | || ||||| || ||||| ||||||||||| || ||||||
Sbjct 151614 TTCGCGGAGCGCCTCGTTGCCTTTGCTGCCGTCGAGGGCATCTTCTTCTCCGGCTCCTTC 151555
Query 94858 TGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916
||| | |||| |||||||||||||| ||||| ||||| || ||| ||||||||||||
Sbjct 151554 -GCGTCCATTTTCTGGCTCAAGAAGCGCGGTCTGATGCCCGGCCTCACCTTCTCCAACGA 151496
Query 94917 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
||| ||| || |||||||| | ||| || |||||
Sbjct 151495 GCTGATCAGCCGAGACGAGGGCTTGCACACCGACTTTGC 151457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583258386758440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |