Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq125 118 7e-22 seq59 93.3 3e-14 >seq125 Length=635640 Score = 118 bits (130), Expect = 7e-22 Identities = 168/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 ||||||| | || || | || | |||||| ||| |||||| || ||||| || || | Sbjct 378614 CGCCGCCGCGGAGCCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 378555 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 | || || ||||||| || || || |||||||| || | |||||| ||||| |||| Sbjct 378554 CCAAGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGCG 378495 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656 | | ||||||||||| |||| || || || ||| | ||| ||||| || ||| Sbjct 378494 GGATGCCCTCCTTGTCCTGGATC-TTGGTCTTGACGTTGTCAATGGTGTCGCCGGACTCG 378436 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 || || | ||| ||||| || || || | ||| || ||||| |||||||| ||| Sbjct 378435 ACCTCGAGGGTGATCGTCTTGCCTGTGAGCGTCTTGACAAAGATCTGCATCTTG 378382 >seq59 Length=598887 Score = 93.3 bits (102), Expect = 3e-14 Identities = 156/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || || | ||| | |||||| || |||||| || ||||| || || | ||| || || Sbjct 73003 AGGCGAAGCACAAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGA 73062 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || || |||||||| || | || || ||||| ||||| | |||||| Sbjct 73063 CCGTCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGTTGCTGGTCAGGCGGGATGCCCTCC 73122 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || || || || | || ||||| || |||||| || | ||| Sbjct 73123 TTGTCCTGGATC-TTGGTCTTGACATTGTCGATGGTGTCACCGGACTCCACCTCGAGGGT 73181 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 ||||| || || || | || || || || ||||||||| || Sbjct 73182 GATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGCTG 73224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728330361123