Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq125 102 7e-17 >seq125 Length=635640 Score = 102 bits (112), Expect = 7e-17 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| || ||| ||| || || || || || ||||| | || || |||| || ||||| Sbjct 378589 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCTTCGAGCTG 378530 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||||| ||||| || |||||||||||||| | || | || ||| |||||| ||| || Sbjct 378529 CTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTT 378470 Query 39201 CTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 |||| ||| | | | || |||| ||||| || || | ||||| | || || | Sbjct 378469 GGTCTTGA-CGTTGTCAATGGTGTCGCCGGACTCGACCTCGAGGGTGATCGTCTTGCCTG 378411 Query 39260 TCAGCGTTTTAACAAAGATTTGCATCTT 39287 | ||||| || |||||||| |||||||| Sbjct 378410 TGAGCGTCTTGACAAAGATCTGCATCTT 378383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429543867186203