Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_031249.1 Length=50127 Score E Sequences producing significant alignments: (Bits) Value seq120 87.8 6e-13 seq121 80.6 9e-11 >seq120 Length=574313 Score = 87.8 bits (96), Expect = 6e-13 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 15286 GCCAACACCGCCGTCCCGGAATCGCTGAAGTTCCCGCACGACGCCGTCGGCTCCGACCAC 15345 |||||| | | ||| || | |||||||| | |||||||||| ||| |||||||||||| Sbjct 3546 GCCAACTCGGGCGTGCCCGCCTCGCTGAACTACCCGCACGACCGCGTAGGCTCCGACCAC 3605 Query 15346 GACTCGATCGGCCTGTTCCAGCAGCG 15371 |||||| | ||||| ||||||||||| Sbjct 3606 GACTCGGTGGGCCTCTTCCAGCAGCG 3631 >seq121 Length=78794 Score = 80.6 bits (88), Expect = 9e-11 Identities = 70/87 (80%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 15285 CGCCAACACCGCCGTCCCGGAATCGCTGAAGTTCCCGCACGACGCCGTCGGCTCCGACCA 15344 ||| | || ||||||||| |||||||| | | ||| |||||||| || | ||||| | Sbjct 38529 CGCAAGCAACGCCGTCCCCGAATCGCTCCAATACCCCCACGACGCGGTGCACACCGACTA 38588 Query 15345 CGACTCGATCGGCCTGTTCCAGCAGCG 15371 ||||||| ||||||| ||||||||||| Sbjct 38589 CGACTCGGTCGGCCTCTTCCAGCAGCG 38615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160284169980558