Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04] 217 sequences; 31,641,441 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq3 93.3 5e-14 seq90 87.8 2e-12 >seq3 Length=168505 Score = 93.3 bits (102), Expect = 5e-14 Identities = 156/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 52797 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 52856 ||||||||| ||||||||||| | || || | | ||||| ||||||||||| | Sbjct 121025 CCTTGTCCACAGTGAATTGAATAGCCTGCGAAGCAGAATGGGTACGGAGATAGTACATCC 120966 Query 52857 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCG 52916 | || || | || |||||||||| ||||||||||| || | | || || Sbjct 120965 CAGTCTTCAAGCCCTTCTTCCATCCGTAGAAATGCATACTCGTCATCTGTCCATTTGACG 120906 Query 52917 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 52976 | || || ||| ||||||| | ||||| ||| |||||| || || | || |||| Sbjct 120905 GTGCTTGTAAATGAATATTCAAACTCTGACTCTGACAGATGAATGCCCCGCGATCCGCAG 120846 Query 52977 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA 53022 |||| | |||||| ||||||| | || ||||| | ||| || || Sbjct 120845 CCATGTCGATGATCTTCTTTTGCGAGATCTCCCAGACAGTCTTGTA 120800 >seq90 Length=104559 Score = 87.8 bits (96), Expect = 2e-12 Identities = 169/249 (68%), Gaps = 3/249 (1%) Strand=Plus/Plus Query 24134 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 24193 ||| || || ||| ||| | ||||||||| | || || | || || || ||||| Sbjct 11128 ACAGGCAAAGTCGGTGTGCATACCCTCGTCACGGCTGATCAGCTCATTACTGAAGGTGAG 11187 Query 24194 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 24253 || ||||| ||||||||||| || | |||||| || || || || || || || ||||| Sbjct 11188 ACCCGGCATGAGGCCACGCTTCTTCAACCAAAAGATTGAAGCGAAGGAACCCGAGAAGAA 11247 Query 24254 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCAT---G 24310 ||| ||||| || || || || |||| | | || || | || | |||| Sbjct 11248 AATGCCTTCGACGGCAGCGAATGCAACCAAGCGCTCGCCGAACGTCGCACGATCATCAGC 11307 Query 24311 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 24370 ||||| | ||||| || || ||| | || ||||| || || ||||| ||||| | Sbjct 11308 AATCCAGCGGAGCGCCCACTCAGCTTTCCTCTTGACACAGGGGATCGTCTCGATAGCGTC 11367 Query 24371 AAAGAGATA 24379 |||||| || Sbjct 11368 AAAGAGGTA 11376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593719989530160