Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04] 217 sequences; 31,641,441 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq90 214 2e-50 seq157 84.2 2e-11 >seq90 Length=104559 Score = 214 bits (236), Expect = 2e-50 Identities = 426/635 (67%), Gaps = 82/635 (13%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||| | || || || |||||||||| |||||| ||||||| Sbjct 11740 ATCTGGCAAATGTACAAGAAGACGGAAGCTTCCTTCTGGACCGCTGAGGAGATGGACCTC 11681 Query 116696 TCCAAGGACACGAGCGACTGGGAGC----GCTTGAACGACAACGAGCGCCATTTCATCAA 116751 || ||||| | ||| ||||| |||| || ||||||||||| || ||||| | Sbjct 11680 TCGAAGGATCTTAACGATTGGGAAAATAAGCTT-AATGACAACGAGCGTCACTTCATTAG 11622 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||||| || || || ||||||||| ||| |||||||| || || || |||||| |||| Sbjct 11621 CCACGTACTTGCTTTCTTCGCCGCCTCCGATGGCATCGTAAATGAAAACCTGGTCAAGCG 11562 Query 116812 -TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCT--------------------- 116849 ||| || | || || |||||||| || ||||| |||| Sbjct 11561 CTTTAGCA-ATGAAGTACAGGTGGCTGAAGCGCGCTGCTTCTATGGCTTCCAAATCATGA 11503 Query 116850 -------------------TCTACGG-----------CTT-----TCAGATCGCCATGGA 116874 ||||||| ||| || |||| ||| || Sbjct 11502 TGTACGTATTTGGTTAGTATCTACGGTGGGATGACAGCTTCTGACTCTGATC-CCAGAGA 11444 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTG--------CGCTCT 116926 |||| | ||||| || | || ||| ||||| ||||||||| | ||||| Sbjct 11443 GAACATACACTCTGAGACCTACTCGCTTCTCATTGACACGTACATTAAAGATCCCGCTCA 11384 Query 116927 TCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAG 116986 || || | ||| |||| |||| ||||||||||| || || ||||| ||| Sbjct 11383 GCGC--GAATACCTC--TTTG----ACGCTATCGAGACGATCCCCTGTGTCAAGAGGAAA 11332 Query 116987 GCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC-TTCGGCGAGCGCCTGGT 117045 || ||||||||||| |||||||| || | || | || | |||||||||||| |||| Sbjct 11331 GCTGAGTGGGCGCTCCGCTGGATTGCTGAT-GATCGTGCGACGTTCGGCGAGCGCTTGGT 11273 Query 117046 GGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCT 117105 || ||||| |||||||| ||| | ||||| ||||| ||||| | || |||||| | Sbjct 11272 TGCATTCGCTGCCGTCGAAGGCATTTTCTTCTCGGGTTCCTTCGCTTCAATCTTTTGGTT 11213 Query 117106 CAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGA 117165 ||||| || ||||||||||| || || || ||||| || ||||| ||| | | ||||| Sbjct 11212 GAAGAAGCGTGGCCTCATGCCGGGTCTCACCTTCAGTAATGAGCTGATCAGCCGTGACGA 11153 Query 117166 GGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCA 117200 |||| |||| ||||||||||||| | || |||| Sbjct 11152 GGGTATGCACACCGACTTTGCCTGTCTTCTCTTCA 11118 >seq157 Length=580562 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 |||| || |||| |||||||| ||||||| |||||||| ||||| || || | |||| Sbjct 74582 GCATTCCTCCGGATCAGCAACGTCTCATCTTTGCGGGCAAGCAGCTTGAGGATGGTCGCA 74641 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 | ||| ||||||||||| ||||||||| | || | ||||| || Sbjct 74642 CTCTCTCTGACTACAACATTCAGAAGGAGTCGACCTTACATCTCGT 74687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217802467920