Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04] 217 sequences; 31,641,441 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3 141 8e-29 seq90 111 1e-19 >seq3 Length=168505 Score = 141 bits (156), Expect = 8e-29 Identities = 240/345 (70%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 23648 ATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCG 23707 |||||||| ||||| ||||| || ||||||||||| |||||||| || || || | Sbjct 119335 ATCATCGCACATTGCTTCAGGGTATCGTAGATGCCTTCGATGCTATCATCCTTCATGCAT 119276 Query 23708 ACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTG 23767 || | ||| || || | ||| | ||| || || |||| ||| || ||||| || Sbjct 119275 ACGAGGAAGCATGAGCTGAGTTGGGGTTTTGGAGTGCCGGCGTTGAAAAGAGTCGGACTC 119216 Query 23768 GCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCC 23827 |||||||| || |||| | ||||| |||||||| || |||| || || || || Sbjct 119215 GCGTGCGTGAAATATCGCTGTGACATGAGATTGTAGGTCTCGACCGCTCGCTCGATATCA 119156 Query 23828 TCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACG 23887 || || ||||||| || || ||||| | ||||| |||||| |||||| | | | Sbjct 119155 CGACCATGGATACCGACAGCAACACGCATGAGCATGTGTTGAGGCCTCTCGGCAATCTTG 119096 Query 23888 CCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTA 23947 ||||| ||| ||| || ||||| || | | || ||||| ||||| || | |||| Sbjct 119095 CCGTTGATTCTGAGAAGGTATGAGCGCTCAAGAGTCTTAAAGCCAAAGTATTGGTAGTGG 119036 Query 23948 AAGTCACGATCGTGCACTATGGCCGAATTCAAAC-GGTACGCATT 23991 || || || |||| || ||| | ||| |||| | | | |||||| Sbjct 119035 AAATCGCGCTCGTAAACGATGACTGAA-TCAAGCAGCTCCGCATT 118992 Score = 89.7 bits (98), Expect = 5e-13 Identities = 124/172 (72%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416 || || ||||| ||||| ||||| |||||||| || || || || ||||| || || || Sbjct 119679 AAGAGGTCCGGAATCCAGAGAGCATAGAACAGATCACGAGCACGAACCTCTTCCTTACCA 119620 Query 23417 GTGTTCTTTTTCAAA--TCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAA 23474 ||| ||| | || || | || || || || ||||||||||| ||||| | || | Sbjct 119619 TGGTT--TTTGCGAAGGTCAAGGAACTCAAAGACATCCGCATGCCAAGGCTCAATATAGA 119562 Query 23475 CGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGT 23526 | || || || || | ||| ||||| |||||||| ||||| ||||| || Sbjct 119561 TGCAGAAGGCACCAGGACGCTTGTTGCCTCCCTGATCAACGTATCGGGCGGT 119510 >seq90 Length=104559 Score = 111 bits (122), Expect = 1e-19 Identities = 228/339 (67%), Gaps = 0/339 (0%) Strand=Plus/Minus Query 57957 GCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGC 58016 || ||||||| |||| | | | || ||||| ||||||||||| || ||||| ||||| Sbjct 11295 GCGACGTTCGGCGAGCGCTTGGTTGCATTCGCTGCCGTCGAAGGCATTTTCTTCTCGGGT 11236 Query 58017 AGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGC 58076 ||| || |||| |||||| ||||||| || ||||| ||||| || || || || || Sbjct 11235 TCCTTCGCTTCAATCTTTTGGTTGAAGAAGCGTGGCCTCATGCCGGGTCTCACCTTCAGT 11176 Query 58077 AACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCT 58136 || ||| |||| || ||||||||| | || || || ||||| || || | | | Sbjct 11175 AATGAGCTGATCAGCCGTGACGAGGGTATGCACACCGACTTTGCCTGTCTTCTCTTCAGC 11116 Query 58137 CACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCG 58196 ||| || | | || | ||| || | || || || || || || || Sbjct 11115 CACCTTCGCCGTCGGCCACACCCTGATATTCTCAAGAGAATCATTACGGAAGCCGTGACG 11056 Query 58197 ATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGAT 58256 || ||| | ||||| | || || || || ||||| | | |||| |||||| | Sbjct 11055 ATTGAACAGGAGTTCCTGACGGATGCGCTTCCGGTCAGCCTCATCGGCATGAACGCGAAG 10996 Query 58257 TTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTT 58295 | |||| |||||||||| |||||||||||| | ||| Sbjct 10995 CTTATGTGCCAGTACATTGAATTTGTTGCCGACCGTCTT 10957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765190858640