Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04] 217 sequences; 31,641,441 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq90 105 8e-18 seq3 100 4e-16 >seq90 Length=104559 Score = 105 bits (116), Expect = 8e-18 Identities = 173/249 (69%), Gaps = 3/249 (1%) Strand=Plus/Plus Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640 ||| || || ||| ||||| ||||||||| | || || | || ||| || ||||| Sbjct 11128 ACAGGCAAAGTCGGTGTGCATACCCTCGTCACGGCTGATCAGCTCATTACTGAAGGTGAG 11187 Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700 || ||||| ||||||||||| || | |||||| || |||||||| || || || ||||| Sbjct 11188 ACCCGGCATGAGGCCACGCTTCTTCAACCAAAAGATTGAAGCGAAGGAACCCGAGAAGAA 11247 Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT---G 33757 || ||||| || ||||| || |||| | | ||| || | || | |||| Sbjct 11248 AATGCCTTCGACGGCAGCGAATGCAACCAAGCGCTCGCCGAACGTCGCACGATCATCAGC 11307 Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817 ||||| | ||||| || || ||| | || ||||| || ||||| || || || | Sbjct 11308 AATCCAGCGGAGCGCCCACTCAGCTTTCCTCTTGACACAGGGGATCGTCTCGATAGCGTC 11367 Query 33818 AAAGAGATA 33826 |||||| || Sbjct 11368 AAAGAGGTA 11376 >seq3 Length=168505 Score = 100 bits (110), Expect = 4e-16 Identities = 245/366 (67%), Gaps = 8/366 (2%) Strand=Plus/Minus Query 63536 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTC 63595 ||||| |||||| || || ||||| | ||| || | || ||| | || | || || Sbjct 119369 AATTGCTAGACCGATCCCACCTGCGGTCTTACTAATCATCGCACATTGCTTCAGGGTATC 119310 Query 63596 ATAGATGCCTTCTATGCTATCATCGATCATG-TTAAGTAGAA--AACAGCTAGACATTTG 63652 ||||||||||| ||||||||||| ||||| || | ||| | |||| | ||| Sbjct 119309 GTAGATGCCTTCGATGCTATCATCCTTCATGCATACGAGGAAGCATGAGCT---GAGTTG 119253 Query 63653 GTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 63712 | | | ||| || || || || | || ||| |||||||| || || | || Sbjct 119252 GGGTTTTGGAGTGCCGGCGTTGAAAAGAGTCGGACTCGCGTGCGTGAAATATCGCTGTGA 119193 Query 63713 AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGAC 63772 | |||||||| ||||| | ||| || ||||| | ||| || || || || || Sbjct 119192 CATGAGATTGTAGGTCTCGACCGCTCGCTCGATATCACGACCATGGATACCGACAGCAAC 119133 Query 63773 ACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGA 63832 |||||| | |||||| ||||| || || |||| ||| ||| ||| | | | ||| || Sbjct 119132 ACGCATGAGCATGTGTTGAGGCCTCTCGGCAATCTTGCCGTTGATTCTGAGAAGGTATGA 119073 Query 63833 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTCTCGTTCGTAAATAATAA 63891 || | ||| ||||| ||||| || | ||| || ||| || || ||||||| || | Sbjct 119072 GCGCTCAAGAGTCTTAAAGCCAAAGTATTGGTAGTGGAAA-TCGCGCTCGTAAACGATGA 119014 Query 63892 CCGAAT 63897 | |||| Sbjct 119013 CTGAAT 119008 Score = 96.9 bits (106), Expect = 4e-15 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 62035 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62094 ||||||||| ||||||||||| | || || | | ||||| ||||||||||| | Sbjct 121025 CCTTGTCCACAGTGAATTGAATAGCCTGCGAAGCAGAATGGGTACGGAGATAGTACATCC 120966 Query 62095 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 62154 | || || | || |||||||||| |||||||||||||| | | || || Sbjct 120965 CAGTCTTCAAGCCCTTCTTCCATCCGTAGAAATGCATACTCGTCATCTGTCCATTTGACG 120906 Query 62155 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62214 | || || ||| ||||||| | ||||| ||| |||||| || || | || |||| Sbjct 120905 GTGCTTGTAAATGAATATTCAAACTCTGACTCTGACAGATGAATGCCCCGCGATCCGCAG 120846 Query 62215 CCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA 62260 |||| | |||||| ||||||| | || ||||| | ||| || || Sbjct 120845 CCATGTCGATGATCTTCTTTTGCGAGATCTCCCAGACAGTCTTGTA 120800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629815891619760