Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04] 217 sequences; 31,641,441 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq3 102 1e-16 seq90 100 4e-16 >seq3 Length=168505 Score = 102 bits (112), Expect = 1e-16 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 78707 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 78766 ||||||||| ||||||||||| | || || | | ||||| ||||||||||| | Sbjct 121025 CCTTGTCCACAGTGAATTGAATAGCCTGCGAAGCAGAATGGGTACGGAGATAGTACATCC 120966 Query 78767 CCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCG 78826 | || || | || ||||||||||||||||||||||||| | | || || Sbjct 120965 CAGTCTTCAAGCCCTTCTTCCATCCGTAGAAATGCATACTCGTCATCTGTCCATTTGACG 120906 Query 78827 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 78886 | || || ||| ||||||| | ||||| ||| |||||| || || | || |||| Sbjct 120905 GTGCTTGTAAATGAATATTCAAACTCTGACTCTGACAGATGAATGCCCCGCGATCCGCAG 120846 Query 78887 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA 78932 |||| | |||||| ||||||| | || ||||| | ||| || || Sbjct 120845 CCATGTCGATGATCTTCTTTTGCGAGATCTCCCAGACAGTCTTGTA 120800 >seq90 Length=104559 Score = 100 bits (110), Expect = 4e-16 Identities = 172/249 (69%), Gaps = 3/249 (1%) Strand=Plus/Plus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 ||| || || ||| ||||| ||||||||| | || || || || || || ||||| Sbjct 11128 ACAGGCAAAGTCGGTGTGCATACCCTCGTCACGGCTGATCAGCTCATTACTGAAGGTGAG 11187 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 || ||||| ||||||||||| || | |||||| || || || || || || || ||||| Sbjct 11188 ACCCGGCATGAGGCCACGCTTCTTCAACCAAAAGATTGAAGCGAAGGAACCCGAGAAGAA 11247 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCAT---G 50135 || ||||| || || || || ||||| | | ||| || | | || | |||| Sbjct 11248 AATGCCTTCGACGGCAGCGAATGCAACCAAGCGCTCGCCGAACGTCGCACGATCATCAGC 11307 Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| | ||||| || || ||| | || ||||| || ||||| || || || | Sbjct 11308 AATCCAGCGGAGCGCCCACTCAGCTTTCCTCTTGACACAGGGGATCGTCTCGATAGCGTC 11367 Query 50196 AAAGAGATA 50204 |||||| || Sbjct 11368 AAAGAGGTA 11376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266851695880