Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04] 217 sequences; 31,641,441 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq90 98.7 2e-15 seq157 89.7 1e-12 >seq90 Length=104559 Score = 98.7 bits (108), Expect = 2e-15 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 269111 GATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTT 269170 ||| | ||| | | ||| || | || ||||| || || || || ||||| || ||||| Sbjct 11301 GATCGTGCGACGTTCGGCGAGCGCTTGGTTGCATTCGCTGCCGTCGAAGGCATTTTCTTC 11242 Query 269171 TCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACT 269230 ||||| || || || | ||||||||||||||||| | ||||| ||||| || | || Sbjct 11241 TCGGGTTCCTTCGCTTCAATCTTTTGGTTGAAGAAGCGTGGCCTCATGCCGGGTCTCACC 11182 Query 269231 TTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGT 269284 ||| ||| || |||| ||| | ||||| ||| | ||| |||||| || ||| Sbjct 11181 TTCAGTAATGAGCTGATCAGCCGTGACGAGGGTATGCACACCGACTTTGCCTGT 11128 >seq157 Length=580562 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || |||||||||||||||||||| || || | || ||||| || ||||| ||| Sbjct 74955 GTAGACTCCTTCTGAATATTATAGTCAGAGAGTGTCCGGCCATCTTCCAGCTGTTTACCA 74896 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTAT 104454 |||||||| || | ||||||||| || || || Sbjct 74895 GCAAAAATGAGGCGCTGTTGATCGGGTGGAAT 74864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151395198752636