Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04] 217 sequences; 31,641,441 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq90 105 8e-18 seq3 96.9 4e-15 >seq90 Length=104559 Score = 105 bits (116), Expect = 8e-18 Identities = 173/249 (69%), Gaps = 3/249 (1%) Strand=Plus/Plus Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 ||| || || ||| ||||| ||||||||| | || || || || || || ||||| Sbjct 11128 ACAGGCAAAGTCGGTGTGCATACCCTCGTCACGGCTGATCAGCTCATTACTGAAGGTGAG 11187 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 || ||||| ||||||||||| || | |||||| || |||||||| || || || ||||| Sbjct 11188 ACCCGGCATGAGGCCACGCTTCTTCAACCAAAAGATTGAAGCGAAGGAACCCGAGAAGAA 11247 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT---G 33479 || ||||| || ||||| || |||| | | ||| || | || | |||| Sbjct 11248 AATGCCTTCGACGGCAGCGAATGCAACCAAGCGCTCGCCGAACGTCGCACGATCATCAGC 11307 Query 33480 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33539 ||||| | ||||| || || ||| | || ||||| || ||||| || || || | Sbjct 11308 AATCCAGCGGAGCGCCCACTCAGCTTTCCTCTTGACACAGGGGATCGTCTCGATAGCGTC 11367 Query 33540 AAAGAGATA 33548 |||||| || Sbjct 11368 AAAGAGGTA 11376 >seq3 Length=168505 Score = 96.9 bits (106), Expect = 4e-15 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 61984 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62043 ||||||||| ||||||||||| | || || | | ||||| ||||||||||| | Sbjct 121025 CCTTGTCCACAGTGAATTGAATAGCCTGCGAAGCAGAATGGGTACGGAGATAGTACATCC 120966 Query 62044 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 62103 | || || | || |||||||||| |||||||||||||| | | || || Sbjct 120965 CAGTCTTCAAGCCCTTCTTCCATCCGTAGAAATGCATACTCGTCATCTGTCCATTTGACG 120906 Query 62104 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62163 | || || ||| ||||||| | ||||| ||| |||||| || || | || |||| Sbjct 120905 GTGCTTGTAAATGAATATTCAAACTCTGACTCTGACAGATGAATGCCCCGCGATCCGCAG 120846 Query 62164 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA 62209 |||| | |||||| ||||||| | || ||||| | ||| || || Sbjct 120845 CCATGTCGATGATCTTCTTTTGCGAGATCTCCCAGACAGTCTTGTA 120800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945510255720