Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04]
217 sequences; 31,641,441 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq90 120 3e-22
>seq90
Length=104559
Score = 120 bits (132), Expect = 3e-22
Identities = 219/318 (69%), Gaps = 2/318 (1%)
Strand=Plus/Plus
Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151
|| ||||||||||| || | ||| ||||| || |||| |||||| ||||| || | |
Sbjct 11129 CAGGCAAAGTCGGTGTGCATACCCTCGTCACGGCTGATCAGCTCATTACTGAAGGTGAGA 11188
Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211
|| || | || || || ||||| | |||||| |||||||| || ||| || || ||
Sbjct 11189 CCCGGCATGAGGCCACGCTTCTTCAACCAAAAGATTGAAGCGAAGGAACCCGAGAAGAAA 11248
Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-CTGCT 93270
|| ||||| ||||| || ||||| || | || ||| | || | || || | | ||
Sbjct 11249 ATGCCTTCGACGGCAGCGAATGCAACCAAGCGCTCGCCGAACGTCGCACGATCATCAGC- 11307
Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330
||||| | ||||| || ||||| |||| | ||| || | || ||||||||||
Sbjct 11308 AATCCAGCGGAGCGCCCACTCAGCTTTCCTCTTGACACAGGGGATCGTCTCGATAGCGTC 11367
Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390
||| ||||| || |||| | | |||| ||||| || || || | || || || |
Sbjct 11368 AAAGAGGTATTCGCGCTGAGCGGGATCTTTAATGTACGTGTCAATGAGAAGCGAGTAGGT 11427
Query 93391 TTCAGAATGGACATTCTC 93408
||||| || | |||||
Sbjct 11428 CTCAGAGTGTATGTTCTC 11445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556859289515080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |