Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04] 217 sequences; 31,641,441 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq90 120 3e-22 >seq90 Length=104559 Score = 120 bits (132), Expect = 3e-22 Identities = 219/318 (69%), Gaps = 2/318 (1%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || ||||||||||| || | ||| ||||| || |||| |||||| ||||| || | | Sbjct 11129 CAGGCAAAGTCGGTGTGCATACCCTCGTCACGGCTGATCAGCTCATTACTGAAGGTGAGA 11188 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | || || || ||||| | |||||| |||||||| || ||| || || || Sbjct 11189 CCCGGCATGAGGCCACGCTTCTTCAACCAAAAGATTGAAGCGAAGGAACCCGAGAAGAAA 11248 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-CTGCT 93270 || ||||| ||||| || ||||| || | || ||| | || | || || | | || Sbjct 11249 ATGCCTTCGACGGCAGCGAATGCAACCAAGCGCTCGCCGAACGTCGCACGATCATCAGC- 11307 Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330 ||||| | ||||| || ||||| |||| | ||| || | || |||||||||| Sbjct 11308 AATCCAGCGGAGCGCCCACTCAGCTTTCCTCTTGACACAGGGGATCGTCTCGATAGCGTC 11367 Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390 ||| ||||| || |||| | | |||| ||||| || || || | || || || | Sbjct 11368 AAAGAGGTATTCGCGCTGAGCGGGATCTTTAATGTACGTGTCAATGAGAAGCGAGTAGGT 11427 Query 93391 TTCAGAATGGACATTCTC 93408 ||||| || | ||||| Sbjct 11428 CTCAGAGTGTATGTTCTC 11445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859289515080