Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04] 217 sequences; 31,641,441 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq95 156 8e-33 seq157 95.1 2e-14 seq94 84.2 4e-11 >seq95 Length=204741 Score = 156 bits (172), Expect = 8e-33 Identities = 344/513 (67%), Gaps = 2/513 (0%) Strand=Plus/Minus Query 268284 CATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGA 268343 |||| ||||| || ||| || |||| ||| || || ||| ||| | |||||| || | Sbjct 114103 CATGTCCCCAGTCTCGCCGGGCATCCAGGTTTCCAAGATACAAGCAATGCTGCTTCCCTA 114044 Query 268344 GCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAG 268403 |||| | |||| |||||| ||||| || |||||||| ||| ||||| | | Sbjct 114043 GCTTGATTTCTGCAGCCGCGCGAGATATTTTGCGCGTCACGAAAGTCCGTCCACGCCGCG 113984 Query 268404 GGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGT 268463 |||| |||||||||||||| || ||||| ||||| |||| ||||| || || | ||||| Sbjct 113983 GGCTTTCGTGGTTGAAGAGAATCCCGTTACACGCATACATCCCATAAGCTTCTCTGTAGT 113924 Query 268464 TCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGG 268523 | | ||||| ||||| | | ||||| | | |||||| ||| |||| || | Sbjct 113923 TTATAGTAATCCAGAATGCATATAGTTTTGCTGCACCATACGGACTACGGGGATAAAATG 113864 Query 268524 GCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTT 268583 | ||| | |||| || | || |||||| ||| | | || || || || |||| Sbjct 113863 GAGTCTTTTCGGTTTGCGGAGTCTCGACGACTTTTCCATACAATTCAGAAGTTGACGCTT 113804 Query 268584 GGTAGAA-CTTTGTTGTTTTTTCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGA 268642 | || || | || ||| || ||||| || | ||||| || || || | || ||| Sbjct 113803 GATAAAAGCGAACGTG-TTTCTCCAGACCACATGTACGGATCGCGTCCAGGAGGCGCAGA 113745 Query 268643 GTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTCGAATGACACCTGGACATGG 268702 || || | ||||| | ||| | || || || | |||||||||||| || | || ||| Sbjct 113744 GTGCCGAGACCATCAATGTCGCCGGTGTATTCTGCCATCTCGAATGATACTTTTACGTGG 113685 Query 268703 CTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCTGCTGCACGATCTTCACGAGG 268762 ||| || || || || || || || ||||| ||| | ||| | || | | Sbjct 113684 GACTGAGCTCCAAGATTGTATACTTCCGTCGGTTGAACCAAGGCAATGATGTAGACTAAG 113625 Query 268763 TTCGTTGAGTCGGTGAGGTCTCCGTAGTGCAAC 268795 || || |||| ||||| || ||||||||| Sbjct 113624 TTGGTACTGTCGCCAAGGTCACCATAGTGCAAC 113592 >seq157 Length=580562 Score = 95.1 bits (104), Expect = 2e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || || | ||| | ||| ||||| ||||| || |||||||| ||||| ||| Sbjct 74145 CCTCCTCGGAGACGAAGTACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGAG 74086 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | || ||||| | |||||||| || || || | | |||||||||||| ||| Sbjct 74085 AGTGTACGACCGTCTTCGAGTTGCTTCCCCGCAAAGATCAAGCGTTGTTGGTCGGGCGGA 74026 Query 68355 AT 68356 || Sbjct 74025 AT 74024 Score = 95.1 bits (104), Expect = 2e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || || | ||| | ||| ||||| ||||| || |||||||| ||||| ||| Sbjct 74424 CCTCCTCGGAGACGAAGTACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGAG 74365 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | || ||||| | |||||||| || || || | | |||||||||||| ||| Sbjct 74364 AGTGTACGACCGTCTTCGAGTTGCTTCCCCGCAAAGATCAAGCGTTGTTGGTCGGGCGGA 74305 Query 68355 AT 68356 || Sbjct 74304 AT 74303 Score = 95.1 bits (104), Expect = 2e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 68252 TACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTC 68311 |||||| ||||| || |||||||||||||||||||| ||| ||| || | ||||| || Sbjct 394373 TACCAAATGTAGAGTAGACTCTTTTTGGATGTTATAGTCGCTGAGGGTACGACCATCCTC 394314 Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGC 68358 | ||||| || ||||| || | || |||||| || |||||||||| Sbjct 394313 GAGTTGCTTTCCAGCGAAAATTAATCGTTGTTGATCAGGTGGAATGC 394267 Score = 93.3 bits (102), Expect = 8e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||| || ||||| ||| || | |||||||| || | || || || || Sbjct 394213 CCCTCCTTGTCCTGGATCTTATTCTTCACCGTCTCGATGGAATCCGAAGACTCCACCTCA 394154 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | |||||| ||||| ||||||||||||||||||||||||||||| Sbjct 394153 AGGGTGATTGTTTTACCCGTGAGGGTCTTGACGAATATCTGCAT 394110 Score = 87.8 bits (96), Expect = 3e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 68254 CCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 ||||||| || || ||||| || || || ||||| || |||||||||| |||||||| | Sbjct 74966 CCAAGTGAAGGGTAGACTCCTTCTGAATATTATAGTCAGAGAGTGTCCGGCCATCTTCCA 74907 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAAT 68356 ||| || || || || ||||| | ||||| ||||||||||| Sbjct 74906 GCTGTTTACCAGCAAAAATGAGGCGCTGTTGATCGGGTGGAAT 74864 >seq94 Length=123970 Score = 84.2 bits (92), Expect = 4e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 224956 CTCCAGGTCCTGGCCTGAGGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAG 225015 ||||||||||| ||| | || |||||| | ||||||| | || ||| |||| || Sbjct 2970 CTCCAGGTCCTCGCCGGTCTGGTAACGCCACAGCATGTACTCGAGCGGTGTCTTGTCAAG 3029 Query 225016 GTGGTTCTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATG 225075 ||||| || || ||||||||||||||||| || ||||| | || || ||| || || Sbjct 3030 ATGGTTATCGATGTGGTGGAAAGCATGCTGCGCAACGTAACCGATAACCAAGTTCGGGTG 3089 Query 225076 CTTCCA 225081 |||||| Sbjct 3090 CTTCCA 3095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921619900099240