Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04] 217 sequences; 31,641,441 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq90 141 9e-29 seq169 82.4 8e-11 >seq90 Length=104559 Score = 141 bits (156), Expect = 9e-29 Identities = 170/227 (75%), Gaps = 7/227 (3%) Strand=Plus/Plus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAA-CGCT 133276 |||||| ||||| || ||||| ||||| || ||||||| ||||| | || ||| |||| Sbjct 11507 GATTTGGAAGCCATAGAAGCAGCGCGCTTCAGCCACCTGTACTTCATT-GCTAAAGCGCT 11565 Query 133277 CGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGA 133336 |||||| ||||| || |||||||| ||| ||||||||| || || || ||||| | | Sbjct 11566 TGACCAGGTTTTCATTTACGATGCCATCGGAGGCGGCGAAGAAAGCAAGTACGTGGCTAA 11625 Query 133337 TGAAATGGCGCTCGTTGTCGTTCAAGC----GCTCCCAGTCGCGCGTGTCCTTGGACAGG 133392 |||| || ||||||||||| || |||| ||||| ||| ||||| || ||| Sbjct 11626 TGAAGTGACGCTCGTTGTCATT-AAGCTTATTTTCCCAATCGTTAAGATCCTTCGAGAGG 11684 Query 133393 TCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 |||| |||||| ||||||| || || || || | || |||||||| Sbjct 11685 TCCATCTCCTCAGCGGTCCAGAAGGAAGCTTCCGTCTTCTTGTACAT 11731 Score = 140 bits (154), Expect = 3e-28 Identities = 176/239 (74%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 || ||||||||| |||| |||||||| | | || || || || ||||| || | Sbjct 11129 CAGGCAAAGTCGGTGTGCATACCCTCGTCACGGCTGATCAGCTCATTACTGAAGGTGAGA 11188 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 || ||||||||||| || || || | |||||| || | ||||| ||||| ||||| Sbjct 11189 CCCGGCATGAGGCCACGCTTCTTCAACCAAAAGATTGAAGCGAAGGAACCCGAGAAGAAA 11248 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCG 133074 | ||| |||||||| ||||| || |||| ||||||||||||||| || | || Sbjct 11249 ATGCCTTCGACGGCAGCGAATGCAACCAAGCGCTCGCCGAACGTCGCACGATCATCAGCA 11308 Query 133075 ATCCAGCGCAGCGCCCATTCGGCCTTTTCT-TTGACGCACGGCATCGTTTCGATGGCGT 133132 |||||||| |||||||| || | |||| || ||||| || || ||||| ||||| |||| Sbjct 11309 ATCCAGCGGAGCGCCCACTCAG-CTTTCCTCTTGACACAGGGGATCGTCTCGATAGCGT 11366 >seq169 Length=386842 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 38347 GAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCA 38406 ||||||| | ||||||||||| || || | || ||||| ||| |||| || | || | Sbjct 382652 GAATTCCGCCTGACCAACAGCGACTAATCTTTGCTGGCAAGCAGTTGGAAGATGGACGAA 382711 Query 38407 CCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 | || | ||||||||||||||| ||||| ||||||| || || || || ||| Sbjct 382712 CGCTTAGCGACTACAACATCCAGAAGGAGTCGACGCTTCACTTAGTACTTCGT 382764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171443281280