Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04] 217 sequences; 31,641,441 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq43 104 7e-17 seq196 91.5 4e-13 >seq43 Length=56145 Score = 104 bits (114), Expect = 7e-17 Identities = 112/146 (77%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902 |||||||||| || ||||| || || ||||||||||||||||| ||| | | || | Sbjct 47093 CGATAGTCATCCGCGACGGAATGGCGTGAGGATTGATGATGATGTCCGGTGTGATACCTT 47034 Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTGTCCG 251961 |||||||||| ||||| || | || | ||| || | ||||| || |||||||||||| Sbjct 47033 CAGCAGTGAAAGGCATGTCTTCTTGA-CGGTAAGTGATACCAATGGTACCCTTTTGTCCG 46975 Query 251962 TGACGAGAACTGAACTTATCACCAAT 251987 || |||||| |||||| || || || Sbjct 46974 TGTCGAGAAGCGAACTTGTCCCCGAT 46949 >seq196 Length=143631 Score = 91.5 bits (100), Expect = 4e-13 Identities = 199/294 (68%), Gaps = 8/294 (3%) Strand=Plus/Plus Query 302554 TCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTT 302613 |||||| | ||| | |||||| | | ||||| | || || || || || ||||| Sbjct 57532 TCATAATGTACCATGACGTCTTCTAGAGCCTTGACAAGCCGTCGTTGGATGTAGCCAGTC 57591 Query 302614 GTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAAT 302673 | || || ||||| || ||||||| ||| | ||||| |||| || || ||||| Sbjct 57592 TCGGCCGTCTTGACAGCGGTGTCAATTAAACCCTCGCGACCCGCCATGGCGTGAAAGAAG 57651 Query 302674 AGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG- 302732 | ||||| |||| || || | | |||| ||||||||||||| |||||||| || Sbjct 57652 AACTCTTGCGGTGTTAATCCACGCAAGTAGGAATTCTCAACGAAACCCCGCGCCTCTGGA 57711 Query 302733 --CGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGT-TCTCATAGCCGTATGGGAT 302789 |||| || ||| || ||||| || | || | | ||| | ||||| | ||||| Sbjct 57712 CTGAAATCATC---CTTCGTGAAGTGCGGTAATGTTCGATGTCT-AAAGCCGAACGGGAT 57767 Query 302790 ACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 |||||| || || ||| ||||| || | ||| | |||||| || || || Sbjct 57768 ACGCTTCCCTTCCACGGATTGCTGACCGACGCAAACAGACATCTGGGAGATGTT 57821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471813507887129