Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04] 217 sequences; 31,641,441 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq90 100 3e-15 seq49 86.0 8e-11 >seq90 Length=104559 Score = 100 bits (110), Expect = 3e-15 Identities = 197/288 (68%), Gaps = 9/288 (3%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||||||| || || || |||| ||| || ||||||||||| ||||| Sbjct 11149 ACCCTCGTCACGGCTGATCAGCTCATTACTGAAGGTGAGACCCGGCATGAGGCCACGCTT 11208 Query 869239 CTTGAGCCAAAAGAT---GGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 869295 ||| | ||||||||| ||| || || |||||||| || ||||| |||||||| || Sbjct 11209 CTTCAACCAAAAGATTGAAGCGAAGGAA---CCCGAGAAGAAAATGCCTTCGACGGCAGC 11265 Query 869296 AAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGC 869355 || | | | |||||| | || |||| | || | ||||| | ||| Sbjct 11266 GAATGCAACCAAGCGCTCGCCGAA--CGTCG-CACGATCATCAGCAATCCAGCGGAGCGC 11322 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 869415 ||| || || || || | || | || | ||| ||||| ||| |||||||| || Sbjct 11323 CCACTCAGCTTTCCTCTTGACACAGGGGATCGTCTCGATAGCGTCAAAGAGGTATTCGCG 11382 Query 869416 TTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | || || || || | || ||||| || || ||||| |||||||| Sbjct 11383 CTGAGCGGGATCTTTAATGTACGTGTCAATGAGAAGCGAGTAGGTCTC 11430 >seq49 Length=43765 Score = 86.0 bits (94), Expect = 8e-11 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 19586 TTTAAGCCGCCGGCCACGATCGGCTCCGCGCAGCAGACGTGCG-AATACGGCGGCGAGCA 19644 || ||| |||| || |||||| || |||||| ||| ||| |||||| |||| | Sbjct 25385 TTCAAGTCGCCCGCGACGATCAGCCAGGCGCAGGCCACG-GCGCAATACGACGGCACCGA 25327 Query 19645 GGCCACGTTGGAGGCGCGCGGGAGGCACGACCCGTGCGTCGTCGCGCGCGCGGTCCCCAT 19704 || | ||| || || || || |||||||||||||||||| ||||||| || || || Sbjct 25326 GGGTGAGCTGGCTGCTCGGGGCAGACACGACCCGTGCGTCGTCCCGCGCGCCGTGCCGAT 25267 Query 19705 CGTCGAGGCCATGGCGGCCATGGT 19728 |||||||| |||||||| |||| Sbjct 25266 TGTCGAGGCGATGGCGGCTCTGGT 25243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107121391963789