Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04] 217 sequences; 31,641,441 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3 116 4e-21 >seq3 Length=168505 Score = 116 bits (128), Expect = 4e-21 Identities = 397/613 (65%), Gaps = 8/613 (1%) Strand=Plus/Plus Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 105045 ||||||| ||| || || ||||| || ||| | || | | | | ||||||||| || Sbjct 120031 GATCAAGTCTTCGAACCTTTGTACTGAGATCATCGAGTATTCTGCTCCAGATGAGACTGC 120090 Query 105046 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT 105105 ||| || ||||| ||||| |||||||| || | | |||| | | ||| | || Sbjct 120091 TGTTTGCAACCTTGCATCCATCGCTCTTCCATCCTTT----ATCC-GCGGCAATAA-ATA 120144 Query 105106 TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTAT 105165 ||| | |||| || || || || ||||| ||||||| ||||| ||| | | || Sbjct 120145 TGACTTCCAAAAGCTGCATGACGTCGCGAAAGTTGTCACCTTCAACCTCAACCGTATCAT 120204 Query 105166 TGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 105225 || || | || || ||| ||||| || || || | | | || ||||| || Sbjct 120205 CGACGTGAACTACTATCCTGTTCCTGAAGCTCGCAACTCGAACACGCGTCATCGTCCGAT 120264 Query 105226 TGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTC 105285 |||| | |||||||| ||||| || ||| || || |||| |||| || || Sbjct 120265 TGGTATTGGTGTTCAAGGTCTTGCAGATACCTTTATGGCGCTTCGCTTACCATTCGACTC 120324 Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA 105345 || || || | || | || || ||||| || |||||||| |||||||| Sbjct 120325 TCCGGAGGCTCGCAAACTTAACATCCAGATCTTCGAGACGATCTATCACGCTGCTCTTGA 120384 Query 105346 GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405 | | || ||| |||| | | ||| ||||| ||| || | ||||| ||| || Sbjct 120385 GTCCAGCAGTGAGATGGCTGTCGCTGAGGGTCCGTATTCGACGTGGGAGGGCAGTCCGGC 120444 Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT-TCACTACGACT 105464 ||| ||||| |||||| | ||| | |||| | ||| ||| || || || |||| Sbjct 120445 TTCGCAAGGCAAGCTTCAGTATGACTTTTGGGGTGTTGA-ACCTAGTGATCTCTGGGACT 120503 Query 105465 GGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTC 105524 || | | |||||||| || | || || ||||||||| | || | || | Sbjct 120504 GGAAGTCACTCAAGGAGAAAATTGCAGCGACTGGCCTTCGTAACTCGTTGCTACTTGCAC 120563 Query 105525 CAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACA 105584 | |||||||| || || || || ||| | || || ||||||||||| ||||||| Sbjct 120564 CGATGCCAACTGCATCGACAAGTCAGATCCTTGGCTTCAACGAATGCTTTGAGCCCTACA 120623 Query 105585 CGACGAACATCTA 105597 | | |||||||| Sbjct 120624 CCAGCAACATCTA 120636 Score = 87.8 bits (96), Expect = 2e-12 Identities = 163/235 (69%), Gaps = 11/235 (5%) Strand=Plus/Plus Query 104506 TATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGC 104565 |||| ||| ||||| ||| | || |||| ||| | || |||||||| | | | | || Sbjct 119449 TATTGCGGGTACAAACGGTTACTCTAATGGAATTGTCCCCATGCTTCGTGCTTATGATGC 119508 Query 104566 CACAGCGCGCTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTA 104619 || || || || || |||| | || ||||| || || ||| |||| Sbjct 119509 GACCGCCCGATACGTTGATCAGGGAGGCAACAAGCGTCCT--GGTGCCTTCTGCA-TCTA 119565 Query 104620 TCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGA 104679 | ||||||| ||||| |||||| || | ||||||||||| | || ||||| ||| | Sbjct 119566 TATTGAGCCTTGGCATGCGGATGTCTTTGAGTTCCTTGACCTTCGCAAAAACCATGGTAA 119625 Query 104680 CGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTT 104733 || |||| | |||| || ||||| |||| |||||||||||||| || ||||| Sbjct 119626 GGAAGAGGTTC-GTGCTCGTGATCTGTTCTATGCTCTCTGGATTCCGGACCTCTT 119679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259217905080