Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04] 217 sequences; 31,641,441 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq29 113 1e-19 seq98 100 9e-16 seq157 96.9 1e-14 >seq29 Length=120554 Score = 113 bits (124), Expect = 1e-19 Identities = 321/488 (66%), Gaps = 14/488 (3%) Strand=Plus/Plus Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 || ||| || || || || |||||| | || || || || || ||||| ||| || Sbjct 112967 TAGTGTCCCGGCTTACTTCAATGATTCGCAACGGCTCGCGACGAAGGATGCCGGCTCAAT 113026 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 || || | ||||||| | || || ||||| || ||||| || || || || || || Sbjct 113027 CGCTGGACTGGATGTTCTTCGTATCATCAATGAGCCGACTGCCGCTGCCATCGCTTACGG 113086 Query 349738 GCTTGATAAAATGAGTGACCAA--GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 || || ||| ||| | || || ||| | || || || ||| | ||||| || Sbjct 113087 TCTGGACCAAA--AGTCAAAAAATGAGCGCAATGTCCTGATCTTCGATCTTGGTGGAGGA 113144 Query 349796 ACTTTTGATGTATCACT----ACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAAC 349851 ||||||||||| || || | || |||| | ||| | |||| ||| || || || Sbjct 113145 ACTTTTGATGTCTCCCTTCTCAATATCACT----GGTGGAGTCTTTGCAGTAAAGGCCAC 113200 Query 349852 TGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGT 349911 |||||||| || || | || ||||| || || |||||| || || |||||| Sbjct 113201 AGCTGGTGACACGCACTTGGGAGGAGAGGACTTCGATAATAACCTTCTTGAGCATTTCAA 113260 Query 349912 TAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTC 349970 || || || ||||| |||| ||||| ||||||| ||| | ||| | ||| | || | Sbjct 113261 GAACGAGTTCAAGCG-CAAGACTAAACTTGATATCTCTGATGACCCTCGCGCACTCCGCC 113319 Query 349971 GCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTA 350030 | || | | || || || ||||| ||||| | | || ||| | | || || || Sbjct 113320 GTCTTCGTTCCGCTTGCGAGCGTGCCAAGCGCACGCTTTCGTCTGTTGCTCAGACAACTG 113379 Query 350031 TTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGT 350090 ||||| |||| ||||| | ||| |||| |||| || ||||| ||||| || Sbjct 113380 TTGAAGTTGACTCTCTATTCCAGGGCGAAGACTTCTCGTCTAACATTACCCGTGCGAAGT 113439 Query 350091 TTGAAGAA 350098 | || ||| Sbjct 113440 TCGAGGAA 113447 >seq98 Length=99245 Score = 100 bits (110), Expect = 9e-16 Identities = 231/346 (67%), Gaps = 3/346 (1%) Strand=Plus/Plus Query 349548 CAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTG 349607 |||||||||| ||||||||||| | ||||| || || | || | || || Sbjct 15919 CAATGGTTTTGTCGAAAATGAAGGAGACCGCTGAGGCTTACCTCGGCAGGAAGGTCACCC 15978 Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 | || ||| | || || |||||||| || || || || |||||| ||||| || |||| Sbjct 15979 ACGCCGTTGTCACCGTCCCAGCCTACTTCAACGACGCTCAGCGTCAGGCAACCAAGGATG 16038 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 | || | || || || | | || || | || | || || || || || || || | Sbjct 16039 CCGGTACGATCGCCGGTCTTACCGTCCTCCGTATTGTAAACGAGCCAACCGCCGCTGCGA 16098 Query 349728 TTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAG 349787 | || ||||| ||||| || | ||| | | | | || || || ||| || | | Sbjct 16099 TCGCTTATGGTCTTGACAAGAAAGGTGGCGA-GCAGAAGATCATCGTATAC--GACCTCG 16155 Query 349788 GTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAG 349847 |||||||||| || ||||| || | || | | || || || | || |||||| | Sbjct 16156 GTGGTGGTACCTTCGATGTCTCCTTGCTGTCCATAGACGAAGGTGTCTTCGAAGTTCTCG 16215 Query 349848 CAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCG 349893 | || || |||||||| ||||||||||| || || ||||| || || Sbjct 16216 CGACCGCCGGTGATACCCATCTTGGTGGTGAGGACTTTGACAACCG 16261 >seq157 Length=580562 Score = 96.9 bits (106), Expect = 1e-14 Identities = 84/103 (82%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| ||||| |||||||| || ||||||||||| ||||| | ||| || |||||||| | Sbjct 74965 CAAG-TGAAGGGTAGACTCCTTCTGAATATTATAGTCAGAGAGTGTCCGGCCATCTTCCA 74907 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAAT 140632 | ||||| |||||||| || || || || ||||| || ||||| Sbjct 74906 GCTGTTTACCAGCAAAAATGAGGCGCTGTTGATCGGGTGGAAT 74864 Score = 93.3 bits (102), Expect = 1e-13 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || ||||| | | || || ||||| | || ||||| || ||||| || || || Sbjct 74709 CATGCCCCCACGCAGACGAAGGACGAGATGTAAGGTCGACTCCTTCTGAATGTTGTAGTC 74650 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||| ||||| || || || |||||||| |||||||||||||| || Sbjct 74649 AGAGAGAGTGCGACCATCCTCAAGCTGCTTGCCCGCAAAGATGAGACGTTGCTGATCCGG 74590 Query 140627 AGGAAT 140632 |||||| Sbjct 74589 AGGAAT 74584 Score = 86.0 bits (94), Expect = 2e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || | ||| ||||||||||||||||| || ||||| || | || || ||||| Sbjct 394375 AGTACCAAATGTAGAGTAGACTCTTTTTGGATGTTATAGTCGCTGAGGGTACGACCATCC 394316 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAAT 140632 || ||||| |||||||| || |||| ||||| |||||||| ||||| Sbjct 394315 TCGAGTTGCTTTCCAGCGAAAATTAATCGTTGTTGATCAGGTGGAAT 394269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515250187119251