Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04] 217 sequences; 31,641,441 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq90 107 2e-18 seq95 82.4 8e-11 >seq90 Length=104559 Score = 107 bits (118), Expect = 2e-18 Identities = 198/290 (68%), Gaps = 3/290 (1%) Strand=Plus/Plus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 || || || | ||| |||| ||||| || | || || ||||| || ||||||||| Sbjct 11150 CCCTCGTCACGGCTGATCAGCTCATTACTGAAGGTGAGACCCGGCATGAGGCCACGCTTC 11209 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888 |||||||||||||| | | ||||||||| |||||| ||||||||||| || || Sbjct 11210 TTCAACCAAAAGATTGAAGCGAAGGAACCCGAGAAGAAAATGCCTTCGACGGCAGCGAAT 11269 Query 74889 GCGACAAGGCGTTGCGCGAACGGTGC---ATCGGAAGTCATCCAAGTCTGAGCCCATTCA 74945 || || | ||| | |||||| || ||| || ||||| | ||||| ||| Sbjct 11270 GCAACCAAGCGCTCGCCGAACGTCGCACGATCATCAGCAATCCAGCGGAGCGCCCACTCA 11329 Query 74946 GCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCG 75005 ||||| | ||||| |||| || ||||| || | |||||| | | || || Sbjct 11330 GCTTTCCTCTTGACACAGGGGATCGTCTCGATAGCGTCAAAGAGGTATTCGCGCTGAGCG 11389 Query 75006 GGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAAT 75055 ||||| || | | | ||||||| | ||| ||||| ||||| || || || Sbjct 11390 GGATCTTTAATGTACGTGTCAATGAGAAGCGAGTAGGTCTCAGAGTGTAT 11439 >seq95 Length=204741 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 124674 ATCTTGCGCGTCAC-AAACTCGGAACCGCGTCGCTCAGACTCGTGGTTGAACAGAATGCC 124732 || ||||||||||| ||| || | || || ||| ||||||||||| ||||| || Sbjct 114017 ATTTTGCGCGTCACGAAAGTCCGT-CCACGCCGCGGGCTTTCGTGGTTGAAGAGAATCCC 113959 Query 124733 AGTACACGCAAACATCCCGTACGACTCGCGGTAGTTTTTCGTCATCCAATACCCAAAGAG 124792 |||||||| ||||||| || | || | ||||||| | || ||||| | || | || Sbjct 113958 GTTACACGCATACATCCCATAAGCTTCTCTGTAGTTTATAGTAATCCAGAATGCATATAG 113899 Query 124793 CTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGGGTGTTTTCATTTTGGGTAG-GTT 124851 || | | ||||| || || ||||| || ||||| || ||||| |||| | || | Sbjct 113898 TTTTGCTGCACCATACGGACTACGGGGATAAAATGGAGTCTTTTCGGTTTGCGGAGTCTC 113839 Query 124852 GCTGAATCTTCCCAAACATCTCCGAAGTACCCGCCTGATAGAA 124894 | || | || ||| ||| || ||||| ||| ||||| || Sbjct 113838 GACGACT-TTTCCATACAATTCAGAAGTTGACGCTTGATAAAA 113797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214515676600