Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04] 217 sequences; 31,641,441 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq3 102 9e-17 seq157 93.3 5e-14 seq95 89.7 6e-13 seq90 84.2 2e-11 >seq3 Length=168505 Score = 102 bits (112), Expect = 9e-17 Identities = 187/269 (70%), Gaps = 10/269 (4%) Strand=Plus/Minus Query 81493 ATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCA 81552 |||| |||||||| ||||||| ||| |||| ||||| | |||| ||| || Sbjct 119368 ATTGCTAGACCGATCCCACCTGCGGTCTTACTAATCATCGCACATTGCTTCAGGGTATCG 119309 Query 81553 TAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGA--- 81609 || || || ||||||||||| | |||||| || | || | ||| || | |||| Sbjct 119308 TAGATGCCTTCGATGCTATCATCCTTCATG-CATACGAGGA--AGCATG--AGCTGAGTT 119254 Query 81610 GGGCTTTTTGA--GCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTG 81667 ||| |||| || |||||| ||||| || || || ||||||| ||||||| || | || Sbjct 119253 GGGGTTTTGGAGTGCCGGCGTTGAAAAGAGTCGGACTCGCGTGCGTGAAATATCGCTGTG 119194 Query 81668 ACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTA 81727 |||| || | ||||| || | || ||||| ||| || ||||||| ||| | Sbjct 119193 ACATGAGATTGTAGGTCTCGACCGCTCGCTCGATATCACGACCATGGATACCGACAGCAA 119134 Query 81728 CACGCATAAACATGTACTGGGGCGTCTCG 81756 ||||||| | ||||| || ||| ||||| Sbjct 119133 CACGCATGAGCATGTGTTGAGGCCTCTCG 119105 >seq157 Length=580562 Score = 93.3 bits (102), Expect = 5e-14 Identities = 82/100 (82%), Gaps = 2/100 (2%) Strand=Plus/Plus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 ||||| || || || || || ||||||| ||||| |||||||||||||||| ||||||| Sbjct 394269 ATTCCACCTGATCAACAACGATTAATTTTCGCTGGAAAGCAACTCGAGGATGGTCGTACC 394328 Query 27571 CT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || ||| |||||||| ||||||| || || ||||| ||| Sbjct 394329 CTCAGC-GACTATAACATCCAAAAAGAGTCTACTCTACAT 394367 >seq95 Length=204741 Score = 89.7 bits (98), Expect = 6e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 24723 TTTTATCAGGCGGGTACGAGTGAGATGTTTGGCAAGGTGCAGGAGACGCCACAGTCGGAG 24782 |||||||| ||| || ||| ||| ||| || || ||||| || || | || Sbjct 113797 TTTTATCAAGCGTCAACTTCTGAATTGTATGGAAAAGTCGTCGAGACTCCGCAAACCGAA 113856 Query 24783 ACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTCAAAGGTGTTCGCGTACTGGATA 24842 | |||||||||||||| || || |||||||| | |||| | | || | |||||| Sbjct 113857 AAGACTCCATTTTATCCCCGTAGTCCGTATGGTGCAGCAAAACTATATGCATTCTGGATT 113916 Query 24843 ACCAAGAACTACCGTGAGGCCCATGGGATATATGCATGCAACGGAATTCTGTTCAACCAT 24902 || | |||||| | || || ||||||| ||||| || ||||| ||||| |||||||| Sbjct 113917 ACTATAAACTACAGAGAAGCTTATGGGATGTATGCGTGTAACGGGATTCTCTTCAACCAC 113976 Query 24903 GA 24904 || Sbjct 113977 GA 113978 >seq90 Length=104559 Score = 84.2 bits (92), Expect = 2e-11 Identities = 174/257 (68%), Gaps = 9/257 (4%) Strand=Plus/Minus Query 64636 GCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGGGCCATCCGGTGGAT---- 64691 ||||| ||||| | ||| ||| | | || ||||| ||||| |||| ||||| Sbjct 11364 GCTATCGAGACGATCCCCTGTGTCAAGAGGAAAGCTGAGTGGGCGCTCCGCTGGATTGCT 11305 Query 64692 GA--ATCGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATT 64749 || |||||| || |||| || |||| | | || || || || ||||| ||| Sbjct 11304 GATGATCGTG---CGACGTTCGGCGAGCGCTTGGTTGCATTCGCTGCCGTCGAAGGCATT 11248 Query 64750 TTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGT 64809 ||||| || || || ||| ||| || || ||| | || ||||| ||||| ||||| ||| Sbjct 11247 TTCTTCTCGGGTTCCTTCGCTTCAATCTTTTGGTTGAAGAAGCGTGGCCTCATGCCGGGT 11188 Query 64810 CTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTT 64869 || | || || ||||||||| || |||||||| | ||| || ||||| | Sbjct 11187 CTCACCTTCAGTAATGAGCTGATCAGCCGTGACGAGGGTATGCACACCGACTTTGCCTGT 11128 Query 64870 ACCCTGTTCAGCCACCT 64886 || ||||||||||| Sbjct 11127 CTTCTCTTCAGCCACCT 11111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570308853033040