Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sanghuangporus_20baumii_20[genbank_20GCA_5F001481415.2_202016-03-04] 217 sequences; 31,641,441 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq95 122 2e-22 seq157 91.5 3e-13 >seq95 Length=204741 Score = 122 bits (134), Expect = 2e-22 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 43984 CAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGACT 44043 |||||||| || || || ||||| ||||| || |||| ||| ||||| |||| |||| Sbjct 113803 CAAGCGTCAACTTCTGAATTGTATGGAAAAGTCGTCGAGACTCCGCAAACCGAAAAGACT 113862 Query 44044 CCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGGATTTGTAAA 44103 || ||||||||||| ||||| ||||||| || || |||||||| | |||||| || | Sbjct 113863 CCATTTTATCCCCGTAGTCCGTATGGTGCAGCAAAACTATATGCATTCTGGATTACTATA 113922 Query 44104 AATTATCGCGAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAATCACGAAAGT 44163 || || | || | |||||||||| | ||||| |||| ||||| |||||||| Sbjct 113923 AACTACAGAGAAGCTTATGGGATGTATGCGTGTAACGGGATTCTCTTCAACCACGAAAGC 113982 Query 44164 CC 44165 || Sbjct 113983 CC 113984 >seq157 Length=580562 Score = 91.5 bits (100), Expect = 3e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| ||||| || |||||||| || || || || ||||||||||||| Sbjct 74705 CCCCCACGCAGACGAAGGACGAGATGTAAGGTCGACTCCTTCTGAATGTTGTAGTCAGAG 74646 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 || ||||| |||||||| || || || || |||||||| | |||||| || || Sbjct 74645 AGAGTGCGACCATCCTCAAGCTGCTTGCCCGCAAAGATGAGACGTTGCTGATC 74593 Score = 89.7 bits (98), Expect = 1e-12 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || |||||||| || || | ||| || || ||||||||||| || | Sbjct 74145 CCTCCTCGGAGACGAAGTACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGAG 74086 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || || || ||||| ||||| ||||||||||| ||||||||||| |||| Sbjct 74085 AGTGTACGACCGTCTTCGAGTTGCTTCCCCGCAAAGATCAAGCGTTGTTGGTCGGGCGGA 74026 Query 282993 ATAC 282996 |||| Sbjct 74025 ATAC 74022 Score = 89.7 bits (98), Expect = 1e-12 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || |||||||| || || | ||| || || ||||||||||| || | Sbjct 74424 CCTCCTCGGAGACGAAGTACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGAG 74365 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || || || ||||| ||||| ||||||||||| ||||||||||| |||| Sbjct 74364 AGTGTACGACCGTCTTCGAGTTGCTTCCCCGCAAAGATCAAGCGTTGTTGGTCGGGCGGA 74305 Query 282993 ATAC 282996 |||| Sbjct 74304 ATAC 74301 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| || || || ||||| | ||||||| || || || Sbjct 394213 CCCTCCTTGTCCTGGATCTTATTCTTCACCGTCTCGATGGAATCCGAAGACTCCACCTCA 394154 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| || |||||||| | ||||| |||||||||||||| Sbjct 394153 AGGGTGATTGTTTTACCCGTGAGGGTCTTGACGAATATCTGCAT 394110 Score = 84.2 bits (92), Expect = 5e-11 Identities = 101/135 (75%), Gaps = 3/135 (2%) Strand=Plus/Minus Query 282860 AATAAAACGTGAACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGAT 282919 |||| |||| ||||| ||||| |||||||||| ||||| || ||||||||||| Sbjct 394400 AATACAACGAAAACCA--ACGCAC-CGAAGTACCAAATGTAGAGTAGACTCTTTTTGGAT 394344 Query 282920 GTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTG 282979 ||| ||||| || || || |||||||| ||||| || || || || || || ||||| Sbjct 394343 GTTATAGTCGCTGAGGGTACGACCATCCTCGAGTTGCTTTCCAGCGAAAATTAATCGTTG 394284 Query 282980 TTGGTCACCCGGAAT 282994 ||| ||| ||||| Sbjct 394283 TTGATCAGGTGGAAT 394269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046736289737918