Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq8 147 3e-30 >seq8 Length=1038518 Score = 147 bits (162), Expect = 3e-30 Identities = 228/320 (71%), Gaps = 13/320 (4%) Strand=Plus/Minus Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604 ||||| ||| || || | || || |||| || ||||||| | |||||||||| | | Sbjct 537354 CATCTTCATAGGTATTGACGGATGCGGGTTATACCCCTCCACCACAAAGTCCTCGTACTT 537295 Query 145605 GAAGTCATCTATGTCCTCCA---CCCGCCTCAGGATCCTGAGCCT-GGGAAAGGGCCGGG 145660 |||||| || |||||||| | || |||| || | | | ||||| | || | Sbjct 537294 GAAGTCTTCGATGTCCTCGATGTCCTCCCTCCCCCATCTCAACTTCGGGAACGCGC--GC 537237 Query 145661 GGCTCCTGGT-CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCC 145719 ||||| | | |||||| | ||| || | |||||| |||| | ||||||||||||||||| Sbjct 537236 GGCTCGCGCTGCAGCTGCATCTTTAGCGCCTCCACATGGTCGCGGTAGACGTGCGCGTCC 537177 Query 145720 CCCAGGACGTGGATGAAGTCCCCGGGCTCGAG---GCCCGTGAGGTGGGCGACCATGTAG 145776 || || ||||||| | || || || ||| |||| | |||||| ||| | Sbjct 537176 CCTAGC---TGGATGATCAGCTCGTGCGCGTCCGTGCCGGTGACGCGGGCGATCATATGC 537120 Query 145777 GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGC 145836 || ||||| | |||| || |||||||||||||| || || |||| |||| |||||||| Sbjct 537119 GTGAGCAGCGCGTAGGACGCGATGTTGAAGGGCACACCGAGGCCCAGGTCCGCCGAGCGC 537060 Query 145837 TGGTACAGCTGGCAGGAGAG 145856 ||||||| |||| ||||| Sbjct 537059 TGGTACATGAGGCACGAGAG 537040 Score = 98.7 bits (108), Expect = 1e-15 Identities = 189/275 (69%), Gaps = 8/275 (3%) Strand=Plus/Minus Query 145996 AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAG 146055 ||||| || |||||||| || || || | | | ||| |||| | || |||||| Sbjct 536810 AGCTGATCGACGCCCTGGCCAGTATAGTCCGCGTCCGCATCCTTGTACTCTGCGCCGAAG 536751 Query 146056 TGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTG---TGCCCCAGC 146112 || | ||| ||||| ||||| ||||| || ||||| || ||| || ||||| ||| Sbjct 536750 TGTCGCCATTGGAAGCCGTATACGGGACCGAGGTCTCC---CTCTCTACGATGCCCGAGC 536694 Query 146113 CCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCG 146172 ||| || ||||||| ||| || || || ||||||||||| |||| | | ||| Sbjct 536693 CCGCGCCCTTCGAGGAACTCCTTCGATCCATTTCCGTCCCAGATCGTGAC-CTTTTTGCG 536635 Query 146173 -GAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCC 146231 ||||| | | ||||| ||| | || ||| ||||||||||| || || | | ||| Sbjct 536634 CGAGAGAACGGTAGAGTCGGTGCAACCGTGGATAAACCAGAGCAGTTCCTCTACTATCCC 536575 Query 146232 CCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 | | |||| || |||||| || | ||||||| Sbjct 536574 GCGCAAGAATGTCCGCTTGGTAGTGATGAGGGGGA 536540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075103529200