Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 4e-12 >seq1 Length=3010126 Score = 87.8 bits (96), Expect = 4e-12 Identities = 157/227 (69%), Gaps = 7/227 (3%) Strand=Plus/Plus Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGA----TG-CAAAGCAATAACGATTTG 101905 ||||||| |||| | | ||||| ||| |||| || |||| || ||| || Sbjct 2094461 CATCAAGCGCAAGGCGGACTGGGCGCTTAGATGGAACTCTGACAAATCATCGACG--TTC 2094518 Query 101906 GCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCA 101965 ||||||| | | || || || || || || ||||| || ||||| ||| | ||||| Sbjct 2094519 GCGGAACGACTCGTGGCGTTCGCCGCTGTGGAAGGGATATTCTTCTCTGGGTCCTTCGCC 2094578 Query 101966 TCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTC 102025 | || |||||| | ||||| | || || ||||||||||||||| |||||| ||| || Sbjct 2094579 GCTATCTTCTGGCTGAAGAAGCGCGGGCTTATGCCTGGTCTCACCTTCTCCAACGAGCTC 2094638 Query 102026 ATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 || | | |||||||| | || ||| ||||| ||| | || || Sbjct 2094639 ATCAGTCGCGACGAAGGCATGCACACCGAGTTTGCCTGCCTCCTATT 2094685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581083819650