Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq8 95.1 1e-14 >seq8 Length=1038518 Score = 95.1 bits (104), Expect = 1e-14 Identities = 209/306 (68%), Gaps = 12/306 (4%) Strand=Plus/Minus Query 21167 GGGGTTCCACGCGCACATAACGATGCGCCGATC-GTGGGGCC--GCCTG-TTAATTAGAT 21222 |||||||||||||| ||| | ||| ||||| || ||||| | || || || | ||| Sbjct 536880 GGGGTTCCACGCGCTCATGATGATTCGCCGGTCTGTGGGATCGTGCTTGATTTTGTGGAT 536821 Query 21223 CCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGT 21282 ||| | |||||||| || || ||||| || |||| ||||| || || ||| Sbjct 536820 GCAC----TCGCGCAGCTGATCGACGCCCTGGCCAGTATAGTCCGCGTCCGCATCCTTGT 536765 Query 21283 ACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGC 21342 |||| || || || |||| ||| ||||| ||||| || || || || || ||||| | | Sbjct 536764 ACTCTGCGCCGAAGTGTCGCCATTGGAAGCCGTATACGGGACCGAGGTCTCCCTCTCTAC 536705 Query 21343 GGTCCCCGAAGCCCTGCGCC--GCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTT 21400 | | |||| ||||| ||||| | | || | || || | ||||||| || | Sbjct 536704 GATGCCCG-AGCCC-GCGCCCTTCGAGGAACTCCTTCGATCCATTTCCGTCCCAGATCGT 536647 Query 21401 TACGCCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTC 21460 || |||||| || |||| ||||||||| | || ||||||||| |||| || Sbjct 536646 GACCTTTTTGCGCGAGAGAACGGTAGAGTCGGTGCAACCGTGGATAAACCAGAGCAGTTC 536587 Query 21461 CTCCAC 21466 ||| || Sbjct 536586 CTCTAC 536581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427774800890400