Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq7 104 2e-17 >seq7 Length=1356190 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||||| || ||||| || |||||||| || || | |||| ||| || ||||| Sbjct 309061 GTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCCAGCTG 309120 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 || || || ||||||| || ||||| |||||||| ||||| || || || ||| || Sbjct 309121 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTATCCTGGATCTT 309180 Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 || | | || | || |||| || ||| ||||| | || | |||||||||||| Sbjct 309181 CGCCTTGACGTTGTCGATCGTATCGGAGGACTCAACCTCGAGCGTGATCGTCTTGCCGGT 309240 Query 139741 CAACGTTTTTACGAATATTTGCATA 139765 |||||| || ||||| ||||||||| Sbjct 309241 CAACGTCTTGACGAAGATTTGCATA 309265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496062573816000