Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 5e-12 >seq7 Length=1356190 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||||| | || | ||||||| || Sbjct 309518 TGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGACCATCCTCCAGCTGC 309577 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || || | ||||| ||||| ||||| ||| | |||||| ||||| || || Sbjct 309578 TTCCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTG 309637 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || |||||| | | | | ||||| || ||| || | ||||||||| || |||| Sbjct 309638 GC--CTTCACGTTGTCGATCGTGTCTGAGGACTCGACCTCGAGGGTGATGGTCTTCCCGG 309695 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 ||| || ||||| || |||||||| Sbjct 309696 TCAAGGTCTTGACGAAGATCTGCAT 309720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405086864487700