Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq4 111 1e-19 >seq4 Length=1660084 Score = 111 bits (122), Expect = 1e-19 Identities = 180/259 (69%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 6232 CCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCG 6291 ||||| ||||||| || || ||||| || || ||||| | ||||||| | || || | Sbjct 1303463 CCAAGATCGAGGGCAAAGGCAACGGCATCAAGACCGTACTCCCCAACATGTCCGACGTGG 1303522 Query 6292 CTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCG 6351 | |||||| ||||| |||||||||| || || | ||||| ||||| || |||| Sbjct 1303523 CGCGCGCGCTCTCGCGCCCGCCCACCTACCCCACCAAGTTCTTCGGCTGCGAGCTCGGCG 1303582 Query 6352 CTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTG 6411 | ||||| || || | || ||||| |||| |||||| ||||| |||| || | Sbjct 1303583 CGCAGACCTCCTTCGACGAAAAGAACGACCGCTACATCGTGAACGGCGCGCACGACGCGA 1303642 Query 6412 CCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCG 6471 || || | || | || |||||||| || |||||| || || || || ||| Sbjct 1303643 CCCGCCTCCGCGAGCTCCTCGACGGCTTCATCGACAAGTTCGTCCTCTGCAAGGCGTGCA 1303702 Query 6472 ATAACCCGGAGACCGAGCT 6490 | ||||||||||| || || Sbjct 1303703 AGAACCCGGAGACGGACCT 1303721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946261101130