Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq7 118 9e-22 seq2 109 5e-19 >seq7 Length=1356190 Score = 118 bits (130), Expect = 9e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || ||||| || ||| |||| || || || || || || Sbjct 309264 ATGCAAATCTTCGTCAAGACGTTGACCGGCAAGACGATCACGCTCGAGGTTGAGTCCTCC 309205 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | |||| || || || || |||||||| ||||| ||||| || Sbjct 309204 GATACGATCGACAACGTCAAGGCGAAGATCCAGGATAAGGAGGGCATTCCTCCCGACCAG 309145 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | ||||| |||||| |||| || |||||| Sbjct 309144 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACCCTCTCTGACTACAAC 309085 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || || || ||| Sbjct 309084 ATTCAGAAGGAGTCGACC 309067 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| || | || || || || |||| ||||| || || | | Sbjct 310001 ATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTTGAGTCGTCG 309942 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || |||||||||||||| || ||||| || Sbjct 309941 GACACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCCGACCAG 309882 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||| ||||| ||| | |||||| ||||| | ||||| |||||| Sbjct 309881 CAGCGTCTTATCTTTGCTGGCAAGCAGCTTGAGGATGGGCGCACGTTGTCCGACTACAAC 309822 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || || || Sbjct 309821 ATTCAGAAGGAGTCGAC 309805 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || ||| |||| || || || || | | Sbjct 309492 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTGGAGGTCGAGTCATCT 309433 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | || || ||||| ||||||||||| || || || || || Sbjct 309432 GACACCATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 309373 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | ||||| ||||| |||| ||||||||| Sbjct 309372 CAGCGTCTCATCTTCGCTGGGAAGCAGCTCGAGGACGGTCGCACTCTCTCGGATTACAAC 309313 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 309312 ATCCAGAAGGAGTCGACC 309295 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || ||||| || || |||| || || || || || | Sbjct 309720 ATGCAGATCTTCGTCAAGACCTTGACCGGGAAGACCATCACCCTCGAGGTCGAGTCCTCA 309661 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || ||||||||||| || || || || || Sbjct 309660 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 309601 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || ||||| || ||| | |||||| || || ||||||| |||||| Sbjct 309600 CAGCGCCTTATCTTCGCCGGGAAGCAGCTGGAGGATGGTCGTACGCTCTCCGACTACAAC 309541 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 309540 ATCCAGAAGGAGTCTACC 309523 >seq2 Length=2907307 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || ||| |||| || || || || || || Sbjct 2173014 ATGCAGATCTTCGTGAAGACGCTCACGGGGAAGACGATCACGCTCGAGGTCGAGTCCTCC 2173073 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| ||||||||||| || || || || || Sbjct 2173074 GACACCATCGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 2173133 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || || ||||| ||| | ||||| ||| ||| | || ||||||||| Sbjct 2173134 CAGCGCCTTATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGTACCCTTTCGGATTACAAC 2173193 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || ||| | ||| | || | || ||||||| ||| Sbjct 2173194 ATCCAGAAGGAGTCGACCCTCCATCTCGTGCTCCGTCTGCGCGGTGGT 2173241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726823449950