Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq21 269 5e-67 seq7 185 2e-41 seq2 152 9e-32 seq5 114 2e-20 seq3 114 2e-20 seq11 96.9 6e-15 seq8 89.7 9e-13 >seq21 Length=547483 Score = 269 bits (298), Expect = 5e-67 Identities = 370/512 (72%), Gaps = 4/512 (1%) Strand=Plus/Minus Query 268284 CATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGA 268343 |||| |||||||| ||||| ||||| | |||||||||| ||||||| |||||| |||| Sbjct 419177 CATGCCCCCAATCACGCTTAGCGTCAACGTTCCCGAGGTACAGGCACGACTGCTTCCCGA 419118 Query 268344 GCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAG 268403 || | | || | |||| | ||| || || |||||||||||| || || | | Sbjct 419117 GCGAGATGTCCGCCACTGCGCGCGAGATCTTGCGCGTCACGAACGTCCTTCCGCGCCGCG 419058 Query 268404 GGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGT 268463 |||||||||||||||| ||||| || |||||||||||||| || || | ||| ||||||| Sbjct 419057 GGCTCTCGTGGTTGAACAGGATCCCATTGCACGCGAACATCCCGTACGACTCGCGGTAGT 418998 Query 268464 TCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGG 268523 | ||||| ||||||| || | | ||| || || ||||||| || || || | ||| | Sbjct 418997 TGACGACGATCCAGTACGCGTAGAGCTTCGCGACGCCGTACGGCGAGCGCGGGTAGAACG 418938 Query 268524 GCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTT 268583 ||||||| | || ||| | || ||| ||||| |||||||| ||| || || | Sbjct 418937 GCGTCGTCTCGCTCTGCGGGGTCTCGACGACCTTGCCGTAGAGCTCGCTGGTGGAGGCCT 418878 Query 268584 GGTAGAACTTTGTTGT-TTTTTCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGA 268642 ||||||| | ||| || |||||||||||| | ||||| || ||||| | || || Sbjct 418877 GGTAGAA-GCGGATGTGCTTCTCGAGACCGCAGGTGCGGATGGCGTCGAGGAGGCGGAGG 418819 Query 268643 GTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTCGAATGACACCTGGACATGG 268702 || || | ||| ||||| | || ||||| | ||||||||| || |||| ||| ||| Sbjct 418818 GTGCCTAGGCCGGAGACGTCGCCGGTGTACTCGGCCATCTCGAAGGAGACCTTGACGTGG 418759 Query 268703 CTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCTGCTGC-ACGATCTTCACGAG 268761 ||| ||||| ||||| || | ||| ||| | || | | || | ||| | ||||| Sbjct 418758 GACTGAGCGCCGAGGTTGTAGATCTCGGTCGGCTGGA-CAGAGGCGATGATGTAGACGAG 418700 Query 268762 GTTCGTTGAGTCGGTGAGGTCTCCGTAGTGCA 268793 ||| || |||| |||| || || ||||||| Sbjct 418699 GTTTGTGCTGTCGCTGAGATCGCCATAGTGCA 418668 Score = 91.5 bits (100), Expect = 3e-13 Identities = 118/161 (73%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 9986 CTTGCCCTCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCG--CCAAACTGC 10043 |||||||| || || || | ||||||||||| ||||||||| ||| ||| || | Sbjct 165375 CTTGCCCTGTAGTGAGATCATGTCCATGAAGTCGAAGGGGTTCGTCGCGTTCCACAC--C 165318 Query 10044 TTGGGGTAACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATC 10103 ||| || || || || || | |||||| || ||||||||||||||||||| ||| Sbjct 165317 TTGTCGTTGCCAAGGGCGACGAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCACATG 165258 Query 10104 AGGTCCGAGTTCATGCCAATCATGCGGCAGGGGATGGCGTC 10144 ||||| | |||||| || || | | | ||||| |||||| Sbjct 165257 AGGTCGGCGTTCATACCGATGAGGGAGACGGGGAGGGCGTC 165217 >seq7 Length=1356190 Score = 185 bits (204), Expect = 2e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | || | ||| || || ||||| || |||||||| ||||| ||| Sbjct 309266 CCACCGCGGAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAG 309325 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||||||| ||||| ||||| | || ||||| || || Sbjct 309326 AGAGTGCGACCGTCCTCGAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCAGGCGGG 309385 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| ||||| || ||||||||||| | ||| || || Sbjct 309386 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATGGTGTCAGATGACTCGACC 309445 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| |||||| || || |||||||||||||||||||| |||||||| Sbjct 309446 TCCAGGGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 309492 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || || ||||| || |||||||| || |||||| Sbjct 309494 CCACCACGGAGGCGAAGGACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 309553 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||||||||||||||| || || | || ||||| || || Sbjct 309554 AGCGTACGACCATCCTCCAGCTGCTTCCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGG 309613 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| ||||| ||| ||||| ||||||| || || || Sbjct 309614 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCTGAGGACTCGACC 309673 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || || | |||||||||||| |||||||| Sbjct 309674 TCGAGGGTGATGGTCTTCCCGGTCAAGGTCTTGACGAAGATCTGCAT 309720 Score = 159 bits (176), Expect = 6e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || ||||| ||||| || || ||||| || ||||| | || | |||||| || | |||| Sbjct 309799 TGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCAAGCTGC 309858 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || || || || || | || |||||||| || || || |||||||| || ||||| Sbjct 309859 TTGCCAGCAAAGATAAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTC 309918 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 ||||||||| ||||||||||| | || || || || | ||||||||| || |||||| Sbjct 309919 GCCTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCAAGGGTGATGGTCTTGCCCGTG 309978 Query 68439 AGGGTCTTGACGAATATCTGCAT 68461 |||||||| ||||| |||||||| Sbjct 309979 AGGGTCTTAACGAAGATCTGCAT 310001 Score = 134 bits (148), Expect = 3e-26 Identities = 157/211 (74%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 68252 TACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTT 68310 ||||||| || || || ||||| || || ||||| || || ||||| || | || || | Sbjct 309054 TACCAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCT 309113 Query 68311 CTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTT 68370 | | |||||| |||||||| || || | || |||||||| |||||||| ||||| || | Sbjct 309114 CCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTATCCT 309173 Query 68371 GAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTT 68430 | ||||| ||||||||| ||||| || || | || || || || | ||||| || | Sbjct 309174 GGATCTTCGCCTTGACGTTGTCGATCGTATCGGAGGACTCAACCTCGAGCGTGATCGTCT 309233 Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || | ||||||||||| || ||||| Sbjct 309234 TGCCGGTCAACGTCTTGACGAAGATTTGCAT 309264 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||| || ||||| |||||||| ||||||||||| | || || || || Sbjct 310175 CCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCG 310234 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||| || || || |||||||||||||| || |||||||| Sbjct 310235 AGAGTGATAGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 310278 >seq2 Length=2907307 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | || | || || || ||||| || |||||||| ||||| || Sbjct 2173240 CCACCGCGCAGACGGAGCACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAA 2173181 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || || | || ||||| || || Sbjct 2173180 AGGGTACGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATAAGGCGCTGCTGGTCAGGCGGG 2173121 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| ||||||||| ||||||||||| | || || || Sbjct 2173120 ATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 2173061 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || |||||||| ||||| ||||| |||||||| Sbjct 2173060 TCGAGCGTGATCGTCTTCCCCGTGAGCGTCTTCACGAAGATCTGCAT 2173014 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||| || ||||| ||||| ||| ||||| ||||| | || || || || Sbjct 2172833 CCCTCCTTGTCCTGGATCTTCGCCTTAACGTTGTCGATCGTGTCAGACGACTCGACCTCG 2172774 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||||| || |||||||||||||||||||| |||||||| Sbjct 2172773 AGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 2172730 >seq5 Length=1587088 Score = 114 bits (126), Expect = 2e-20 Identities = 101/126 (80%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 225514 GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTC 225573 |||||| || |||||| |||||||| |||||| || || || || || ||||||||||| Sbjct 1109433 GAGCCAAGCGACGTTGACGACGTCCAAGTGGTTGGTCGGCTCATCGAGGAGCAGGATGTC 1109492 Query 225574 AGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGA 225633 || | | ||| ||||| |||| ||| | |||||||| ||||| || ||||||||||| Sbjct 1109493 GGCCTTGAAGAGCATGGCACGCGCGAGCGCGAGCTTCATCTTCCAACCACCGGACAGGGA 1109552 Query 225634 GCCGAT 225639 |||||| Sbjct 1109553 GCCGAT 1109558 Score = 109 bits (120), Expect = 1e-18 Identities = 147/204 (72%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 224956 CTCCAGGTCCTGGCCTGAGGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAG 225015 ||||| ||||| ||| | || ||||| | ||||||| | || ||| |||| || Sbjct 1108820 CTCCATGTCCTCGCCAGTCTGGTAGCGCCAGAGCATGTACTCGAGCGGCGTCTTGTCGAG 1108879 Query 225016 GTGGTTCTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATG 225075 |||||| || || ||||||||||| |||||||| ||||| | ||| || ||| || || Sbjct 1108880 GTGGTTGTCGATGTGGTGGAAAGCGTGCTGGGCGACGTAGCCGATGACCAAGTTCGGGTG 1108939 Query 225076 CTTCCA---CACAGAGCCCCGAGTCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGT 225132 |||||| | || |||| |||| | |||||| ||||| | ||||| ||| || Sbjct 1108940 CTTCCAGATCTCACCGCCCTTGTTCGGCTCCATCTCGCCAGTGAGCAACTTGACGAGAGT 1108999 Query 225133 AGTCTTGCCCGCACCATTGGGGCC 225156 | |||||| | ||| |||||||| Sbjct 1109000 GGACTTGCCGGAACCGTTGGGGCC 1109023 Score = 93.3 bits (102), Expect = 8e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 225857 AGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATG 225916 ||||| |||||| | ||||| |||| ||| ||||| | | || ||||||| | Sbjct 1109820 AGGGTCGACTTGCCGGTACCGTTCTTACCGCAGAGACCGTAGCGGTGGCCACGCTTGAGG 1109879 Query 225917 TTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCG 225976 |||| | || ||| || ||||||||| |||| ||||| || ||||||| ||| | | Sbjct 1109880 CGGAGGGTAGCGGTGTTGAGCAGGATCTTGGCACCGTAGGCGAGCGAGAACTGGCAGTTG 1109939 Query 225977 CACAGGTCCTCACCCTCCTCG 225997 ||||||||||| ||||||||| Sbjct 1109940 CACAGGTCCTCGCCCTCCTCG 1109960 >seq3 Length=1901115 Score = 114 bits (126), Expect = 2e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 9943 CCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGGGAAA 10002 ||||| ||| ||| ||||| || || ||| |||||||||| |||||||| ||| || | Sbjct 1719647 CCGCCATCTTGTAGTCCGACACACGCTTCTCAAAGAAGTTGGTCTTGCCCTGGAGCGAGA 1719706 Query 10003 TGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGTGCTG 10062 | | ||||||||||| || |||||| || || ||| || ||||| || Sbjct 1719707 TCATGTCCATGAAGTCGAACGGGTTCGTCACGTTGTACACCTTCTCGTTGCCGAGGGCGA 1719766 Query 10063 TGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATGCCAA 10122 || | |||||| || ||||||||||||||||||| ||| || |||||||||||||| Sbjct 1719767 CGAGCAGGCGGTCGGCGACGAACTCGATGTACTGGCACATAAGCGTCGAGTTCATGCCAA 1719826 Query 10123 T 10123 | Sbjct 1719827 T 1719827 >seq11 Length=779764 Score = 96.9 bits (106), Expect = 6e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 ||||||||||| |||||||| ||||| || ||||| ||||| | || || || || Sbjct 380480 CCTTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATAGTGTCCGACGACTCAACCTCG 380421 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 | |||||| || || ||||| |||||||||||||| ||||||||| || Sbjct 380420 AGGGTGATCGTCTTCCCCGTCAGGGTCTTGACGAAGATCTGCATTTTG 380373 >seq8 Length=1038518 Score = 89.7 bits (98), Expect = 9e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 31380 GGACCGTGCTCTTCCGCGAGTTCGCAAGAGGCCTCCACCGCTGCAAAGTAAATATTCTCA 31439 || || | ||| || ||||| || | || ||||| |||||| ||| || |||| Sbjct 199846 GGGCCCTCCTCCTCGGCGAGGTCAGAGGACGCCTCGCACGCTGCGTGGTAGATCGTCTCG 199787 Query 31440 AAGATTTCCCGGTTGAGGTTCTTGGCCGCGTCAGAGTCAAAAGGCATGCGCAGCTTGAAG 31499 ||||| | | ||| || | ||| || ||||| || |||||||||||| | Sbjct 199786 AAGATCTGCTTGTTCAGCTCGCGCGCCTCGGGCGAGTCGAACGGCATGCGCAGCGCCATA 199727 Query 31500 AACACGTCCTGAAGACCCTGGACACCCACTCCAATTGGGCGCCGGCGCATGTTACTAG-T 31558 || |||| || ||||||||||| | ||||| ||||| |||||||||| | || Sbjct 199726 AAGGCGTCGGCGAGGCCCTGGACACCGAGACCAATGGGGCGGTGGCGCATGTT-CGAGCG 199668 Query 31559 CTTCGCCTCGGGAATTGCGTAGGACATGACGTCAATGCTCTTGTCGAGGTT 31609 | |||||||||| | | |||| | ||||||| ||| |||||| ||||| Sbjct 199667 CCTCGCCTCGGGGACCGGGTAGTAGTTGACGTCGATGATCTTGTTCAGGTT 199617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921619750335600